Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0238 ATGGTGGAGATGACAAATGAGAGAATTAAGATGATCGATGTAGTAATAATAGGAGGATTGATAGGAGTGCAAGTTGTGTACGCTGGGAACGCTATGATTATGAGTTTTCTTATGTCTTTGGGTCTCAGCTCTCTTACCATTGTCATCTACACTTCGTTGGCTACATTCCTCGTTCTTTTACCCTTTTCCTTTTATTTTGAAAGAACAAAATGGCCCAATAAATTCAGTCTGAAGCTTATTATAAATCTATTGGTGCTTTCATTTGGAGGGGTATCTTTGTTCCAGTCATTATTTTTAAAAGGAATCATTCTAACTTCGCCAGCAATGGGAACTGCTATGCCAAACCTTGCCCCAGGTCTTATCTTCGTCATCGCATGGGCTTTTAGGTTAGAGAAAGTGGAGTTAAGTTGTCAATATAGTCAGCTGAAAATCATTGGCACATTGCTATGCGTTGTAGGAGCTCTCACCCTCAGCATTATGCAAAGCCTCTCAGTTCCATCCTCCCCAAAGGAGGATACTCAAGTTGGCCTCATTTCCTCTGCTTCACATTCCACCTTTGACGCTGACAAAATCATCGGTTCCTTCTACCTCATGGCTGCAGTCTTCATTTTGTCCACCAATGTTGTCCTCCAGGCTATTACGTTGGGAGAATTTCCTGCACCAATGACTTTGAGCGCAATAACATCCTTCCTTGGAGCTCTTATGACTATAATGCTTCAGTTGCTTCAAGACCACTCCTTTGACACTGGCTGGGCCCTTGTGAGTTTTGGGAACCTCATAGCCTACTCTTTTCTGGCAGGTGCGATGGGTGGAATATGCCTCAGCTTTAATGGATGGGCACTGAAGAAGAGAGGGCCTGTCTTGGTCTCCATGTTTAGCCCCGTTGCTACTGTTTGCTCTGTCATTTTCTCTGTCATTACTCTTGGATACTCCATGAATATTGGAAGCCTTGCGGGTATGTTGATAATGTTCACGGGGCTCTACTTTGTGCTTTGGGCTAAAGGAAAAGAAGGATACGCAAATGGAAATGACTCAGAGAAAGCATAA 1047 0.4317 MVEMTNERIKMIDVVIIGGLIGVQVVYAGNAMIMSFLMSLGLSSLTIVIYTSLATFLVLLPFSFYFERTKWPNKFSLKLIINLLVLSFGGVSLFQSLFLKGIILTSPAMGTAMPNLAPGLIFVIAWAFRLEKVELSCQYSQLKIIGTLLCVVGALTLSIMQSLSVPSSPKEDTQVGLISSASHSTFDADKIIGSFYLMAAVFILSTNVVLQAITLGEFPAPMTLSAITSFLGALMTIMLQLLQDHSFDTGWALVSFGNLIAYSFLAGAMGGICLSFNGWALKKRGPVLVSMFSPVATVCSVIFSVITLGYSMNIGSLAGMLIMFTGLYFVLWAKGKEGYANGNDSEKA 348
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0238 348 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020
Dere13g0238 348 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020
Dere13g0238 348 PANTHER WAT1-RELATED PROTEIN 19 338 IPR030184 GO:0016020|GO:0022857
Dere13g0238 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 335 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere13g0238 Dere-ChrDere13 3469330 3475083 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0238 1 347 Nodulin-like Gene Family AT5G47470 58.689 1.26e-141 404