Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0210 ATGGATTTGAAGTCGTCACATGCTTCTCCTGTTCTCACTGATCCTGTTCCCATCAACAAGTCAAGACTAGGAATCCATCCTACTCTGATAAGTTACTCCCACCAAGATCCACCTCTCTCACTCTCTCCCGGTAAGTATTCAAGAAGCAGTTCCAGGAAAAGTTCAGCCAGTGTTGATGATGTTCGATCCAATGGCTGGCTCGACGCCATGAAGGCCTCTTCTCCTCCCAGGAAGAAGCAAAGTAAGGGCTTTAACGCTCACGTCGATGCTGAAGATGACTATCACTCCTGGTTGCATGATTATCCATCAGCAATGGAGTGTTTTTGGGAATTGGTTGAGCATGCAAAGAATAAGGAGATTGCCATGTTCCTGGACTACGATGGCACTCTTTCACCAATAGTGGATGATCCAGATTGTGCTTTTATGTCTGAATCTATGCGAGCAGTAGTGAGAAGTGTGGCAAAGTGTTTTCCCACGGCAATCATCACTGGAAGAAGCCGTGACAAGGTTTACGATTTAGTTAAACTAACGGAACTTTACTATGCTGGTAGTCATGGGATGGACATCATTGGACCTGCCTGTCACACTCTGTCCAATAGCCATCCAAATTGTGTCAAGTCTACTGACCAACTGGGAAAGGAGATAACTCTGTTTCAACCTGCCAGAGAATTCTTGCCCATGATTGATGAGGTTTTTATAAAGCTCGTCGAGATCACTAAAGATATAAAAGGCGCAAAAGTCGAGAATCACAAGTTTTGCGTCTCTGTACATTATCGTAATGTAGAAGAAAATAAGTGGACAGTTATTGGACAACTCGTGCATGACGTGTTAAAAAGTTACCCTCTTTTACGTTCTACTCACGGACGGAAGGTTTTAGAGGTCCGTCCTGTGATTGATTGGAACAAAGGAAAAGCAGTTGAATTCTTACTCGAGTCTCTAGGGTTAAGTGACAGGGATGACGTGCTTGCCATCTACATAGGAGATGATAGGACCGATGAAGATGCATTCAAGGTGCTGCGAGAGAGCAACAGAGGTTATGGGATTTTGGTTTCGTCTTCCATGAAACAAAGCAATGCCTTCTATTCTCTCCGAGACCCAACTGAGGTCATGAAATTTCTGCAACTCTTGGTGAACTGGAAGTGGCAAGAAGAAAAAAAGTACCGAGGGGAGAGGCATTCGTTTTAA 1185 0.4414 MDLKSSHASPVLTDPVPINKSRLGIHPTLISYSHQDPPLSLSPGKYSRSSSRKSSASVDDVRSNGWLDAMKASSPPRKKQSKGFNAHVDAEDDYHSWLHDYPSAMECFWELVEHAKNKEIAMFLDYDGTLSPIVDDPDCAFMSESMRAVVRSVAKCFPTAIITGRSRDKVYDLVKLTELYYAGSHGMDIIGPACHTLSNSHPNCVKSTDQLGKEITLFQPAREFLPMIDEVFIKLVEITKDIKGAKVENHKFCVSVHYRNVEENKWTVIGQLVHDVLKSYPLLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSDRDDVLAIYIGDDRTDEDAFKVLRESNRGYGILVSSSMKQSNAFYSLRDPTEVMKFLQLLVNWKWQEEKKYRGERHSF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0210 394 Gene3D - 120 213 IPR023214 -
Dere13g0210 394 Gene3D - 229 393 IPR023214 -
Dere13g0210 394 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 48 386 IPR044651 GO:0004805|GO:0005992
Dere13g0210 394 MobiDBLite consensus disorder prediction 34 61 - -
Dere13g0210 394 Pfam Trehalose-phosphatase 123 366 IPR003337 GO:0003824|GO:0005992
Dere13g0210 394 NCBIfam trehalose-phosphatase 222 377 IPR003337 GO:0003824|GO:0005992
Dere13g0210 394 NCBIfam HAD-IIB family hydrolase 122 340 IPR006379 -
Dere13g0210 394 FunFam Trehalose 6-phosphate phosphatase 227 386 - -
Dere13g0210 394 SUPERFAMILY HAD-like 121 379 IPR036412 -
Dere13g0210 394 CDD HAD_TPP 121 371 - -
Dere13g0210 394 FunFam - 120 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0210 Dere-ChrDere13 3129633 3131793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0210 114 376 Trehalose Biosynthesis Gene Families AT1G70290 25.357 4.20e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0210 13 3129633 3131793 Dere13g0210 13 3129633 3131793 ECH