Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0206 ATGTCATCCTCTTCTACTTCTACCACTACCTCTACCTTAACCCAGCTGGACCACTTCCCTCCTTCCGACCAGCTTTGTTATGTCCAATGCAACCTTTGTGACACTGTCCTCGCCGTAAGTGTTCCTTGCTCGAGCTTGTTCAAGACGGTGACTGTGCGATGCGGGCACTGCACCAATCTGCTGCCAGTGAACATGAGAGGATTGCTTCTGCAATCGCCCAATCAATTTCACTTGCCTCACTCTTTATTGTCTCCTCCGTCTCTTAACCTCCTGGAGGAGACGCCAAACTCATCAAACCATTACTTCTCCATGCCTACTCCTAGGGTTGCAGCTGATGAATTTCCACGCCCACCCCTCATAAATAGACCCCCCGAGAAGAGGCAGAGAGTCCCCTTAGCCTACAACCGATTCATTAAGGACGAGATCCAACGCATCAAGTCTGTCAATCCTGATATAACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCTCACATCCACTTTGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCGGGAAGGAGAGGACGTTTGCATGAAAGATGGGTTTTTTGCTTCGGCTAATGTTGGTGTTTCTCCCTACTAA 636 0.4984 MSSSSTSTTTSTLTQLDHFPPSDQLCYVQCNLCDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLQSPNQFHLPHSLLSPPSLNLLEETPNSSNHYFSMPTPRVAADEFPRPPLINRPPEKRQRVPLAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVCQREGEDVCMKDGFFASANVGVSPY 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0206 211 Pfam YABBY protein 21 175 IPR006780 GO:0007275
Dere13g0206 211 SUPERFAMILY HMG-box 119 168 IPR036910 -
Dere13g0206 211 FunFam Axial regulator YABBY 120 191 - -
Dere13g0206 211 CDD HMG-box_SF 133 165 - -
Dere13g0206 211 PANTHER PROTEIN YABBY 6-RELATED 1 185 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0206 Dere-ChrDere13 3105485 3108297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0206 22 176 C2C2-YABBY Transcription Factor Family AT2G26580 57.419 4.52e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dere13g0206 YABBY 1.3e-67 CL0114