Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0197 ATGGCAAGACTTGGGATTTCTTTACTGCTGCTGAACCTCCTCATTTACATGCCAGAATCCGCCATTGCCAGACCATCCAACCCCACAGATTTCATCAAATCCTCATGCAGAGCCACTCGCTACCCTGTTTTATGCGTTCAATCTCTGTTACGCTATGCAAGCGTGGTCCGCCAAAGCGAGCGACAACTAGCCATGACTGCTTTGTCATTGAGCATATCCAGGACTCAATCGTGCGCAGCGTTTGTGAAGAAGTTGGGCCAAGCAAGAAGGGTTAAGGCCAGGGACCATAGAGCCATACAAGACTGCATAGAGAACATGGACGATAGCGTGGACCGTCTTAGCGAATCGGTTCGGGAGCTAGGACGGACCGGTCTGCCCGTGGGTGACGACTTCGAGTGGCACATGAGCAACGTGCAGACTTGGGTTAGTGCGGCTCTCACTGACCAAACCACTTGTCTTGATGGCTTTGCTGGTCCTCGTTTCGATGGAAACCTCAGGGCTGCCATCAGGCGCAGGGTCGTTAATGTTGCTGAAGTCACTAGTAATGCACTTGCTTTGGTTAATCGCTTTGCCTCAAGGCATCGAACTTAG 591 0.5161 MARLGISLLLLNLLIYMPESAIARPSNPTDFIKSSCRATRYPVLCVQSLLRYASVVRQSERQLAMTALSLSISRTQSCAAFVKKLGQARRVKARDHRAIQDCIENMDDSVDRLSESVRELGRTGLPVGDDFEWHMSNVQTWVSAALTDQTTCLDGFAGPRFDGNLRAAIRRRVVNVAEVTSNALALVNRFASRHRT 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0197 196 CDD PMEI-like_3 34 192 - -
Dere13g0197 196 Pfam Plant invertase/pectin methylesterase inhibitor 30 186 IPR006501 GO:0004857
Dere13g0197 196 NCBIfam pectinesterase inhibitor domain 6 188 IPR006501 GO:0004857
Dere13g0197 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 190 IPR035513 -
Dere13g0197 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 186 - -
Dere13g0197 196 FunFam Pectin methylesterase inhibitor 1 27 190 - -
Dere13g0197 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 190 IPR035513 -
Dere13g0197 196 SMART PMEI_2 27 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0197 Dere-ChrDere13 3014250 3014840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0197 32 187 Carbohydrate Esterase AT3G14310 32.484 1.29e-24 98.6