Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0180 ATGTATCTAGAAAGAACGGAGTTGAATTTTCAAAATGTTGGTTTTATGGTACAACAATCATATCGAGAATGGTGGCGAGATTGTGAGTGGCGCCAAAATGATTCAAGTGGAGGCATCATTTTCAGTAGTGCTCATCGCAACGATGAATTTGAGCAGCAAAGAACTACGAACAAAGTCGCACTGGGTGAAAAAGAAGTTCCGAGGTGGAAATTGGGATACACACTGATATGGGTGTCTTCCTTTCAGCTTCAGTTTGAAGAGGTTAAAGATTTTGCACCAGAATCAGAAATGAATTGCGTTCATTTCCTGCTTTCTCTGTTTCTACTTTTGCTTACATTTCCTAGCCTGCAACCTGTTCGAGGGAACGCAGAGCTTAGAGCTTTGATGGAGTTGAAGTCGTCTCTGGATCCAGAGGGCAAGTTCCTTGGGTCGTGGACCAGTGATGGTGACCCATGTAGTGGTTCATTCGAAGGGATAGCGTGCAACGAGCACAGGAAAGTGGCCAATATTTCGTTGCAGGGAAAGGGGCTCTCGGGATGGGTCTCTCCTAGAGTGGCAGAACTCAAATGTTTGTCAGGTTTATACTTGCACTACAACAATCTCTCAGGGGAGATTCCCAGAGAGATTTCAAATCTATCTGATTTGGTCGATCTCTATCTCAACGTAAATAATCTATCTGGAAACATTCCTCTCGAGCTGGGCAACATGCCTAGTCTCCAAGTGCTGCAGTTAGGTTATAACCAGCTGGTGGGGACAATACCTAAAGAGATGGGTTCCTCGAAGCAGCTTACCGCTCTAGCTTTGCAATGTAACAAACTAACCGGTCCAATTCCTCCAAGCTTGGGGAACTTGGGGAGGCTAGGGATGCTAAATTTGAGCTTTAACAACTTCAATGGTGCAATCCCCGCAAAACTTGCTGTTCTTGCAAATTTGCGAGTCCTAGATATTCAAAACAATTCTCTATCTGGGATTGTTCCTTCTGCAATGAAGAGATTGGGGGAAGGATTCCAATATGCAAACAACCCCGATTTATGTGGAACTGGGTTTTCTACTTTGAGAGCTTGCAGCAAAGACCAATATCTAAACGTTAACCAGATCGACACCTCAGATCTAACCGCAAAAAGTATTCCTTCAAAGAATTTTCCTGAGCCTGCAAATCTCCAGTTGCATTGTAACCAGACCCATTGCTCAAAATCAAGAAGGTTTCCTCAAACTCTCATTGCAGCAAGTGTTATAACTATCATAATCACATTCATAGGCGCTGGTTTCTTGACTTTTGTCAAATATCGCCGCCAAAAGCAAAGAATTAGGAGCACATCAGAATCTTCTGAAGGGCAACTTAGTCCTGATCAGCCTAAGGACCTCTACAAAAGAAGTCCATCGCCACTCGTCAATCTTGAGTATTATAATGGATGGGATTCTTTGGCTAATGCTCAACATGGGAATGGATTATCTCATGAGTATCTAAACCGTTATAGGTTCAATGTGGATGAAGTTGAATCTGCAACACAGTACTTTTCTGAGGCCAACTTATTGGGTAAAAGCAAATTATCAGCAGTCTATAAAGGTGTTCTCAGGGATGGTTCTCTTGTGGCTATTAGAAGCATTAATGTGACATGCTGCAAGACAGAGGAAGTTGACTTTGTAAATGGGTTGAACTTATTAACCTCATTGAGACATGAAAACCTAGTCAGGCTGAGAGGTTTCTGTTGCTCAACGAGTAGAGGTGAATGTTTCCTTATCTATGACCTTGCCCCCAACGGTGACCTGTCTCAATCTCTTGACATTGACGATGAAAGTAGTCATGTACTCGAGTGGTCCAAGAGGGTTTCTATCATTAAGGGCATTGCAAAAGGTATTGGATATCTTCACAGCAATGAAACAAACAAACCTACAATAGTCCACCAAAATATTTCCGCTGAAAAAGTTGTCCTTGACCATCAGTTTAACCCATTGATTATGGATGCTGGCCTCCCTAAGCTTCTTGCAGACGATGTTGTTTTCTCAGCTCTGAAAGTAAGTGCTGCCATGGGATACCTAGCTCCTGAATACATTACTACTGGCCGATTTACTGAGAAAAGTGACATATATGCATTCGGGGTTATAGTTCTTCAAGTTGTATCTGGGAAGAAAACAGTAGGTGGTTCAATCAGGATGGCAGTTGAGTCATTCAGATCTGAAGATTTTGTTGACACAAATTTGAATGGAAGATATGCTAAATCTGAAGCAGCAATGCTTGCAAAGCTCGCAGTGGTGTGCACCCATGAGCTTCCTGACCAGAGGCCAACTATGGAGGAGGTGATTCAGGAGCTGAATGCTTTTACTGCACAACACACTTCATGA 2343 0.4277 MYLERTELNFQNVGFMVQQSYREWWRDCEWRQNDSSGGIIFSSAHRNDEFEQQRTTNKVALGEKEVPRWKLGYTLIWVSSFQLQFEEVKDFAPESEMNCVHFLLSLFLLLLTFPSLQPVRGNAELRALMELKSSLDPEGKFLGSWTSDGDPCSGSFEGIACNEHRKVANISLQGKGLSGWVSPRVAELKCLSGLYLHYNNLSGEIPREISNLSDLVDLYLNVNNLSGNIPLELGNMPSLQVLQLGYNQLVGTIPKEMGSSKQLTALALQCNKLTGPIPPSLGNLGRLGMLNLSFNNFNGAIPAKLAVLANLRVLDIQNNSLSGIVPSAMKRLGEGFQYANNPDLCGTGFSTLRACSKDQYLNVNQIDTSDLTAKSIPSKNFPEPANLQLHCNQTHCSKSRRFPQTLIAASVITIIITFIGAGFLTFVKYRRQKQRIRSTSESSEGQLSPDQPKDLYKRSPSPLVNLEYYNGWDSLANAQHGNGLSHEYLNRYRFNVDEVESATQYFSEANLLGKSKLSAVYKGVLRDGSLVAIRSINVTCCKTEEVDFVNGLNLLTSLRHENLVRLRGFCCSTSRGECFLIYDLAPNGDLSQSLDIDDESSHVLEWSKRVSIIKGIAKGIGYLHSNETNKPTIVHQNISAEKVVLDHQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVVSGKKTVGGSIRMAVESFRSEDFVDTNLNGRYAKSEAAMLAKLAVVCTHELPDQRPTMEEVIQELNAFTAQHTS 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0180 780 ProSiteProfiles Protein kinase domain profile. 506 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0180 780 SUPERFAMILY L domain-like 124 331 - -
Dere13g0180 780 Gene3D Ribonuclease Inhibitor 123 233 IPR032675 -
Dere13g0180 780 FunFam Protein NSP-INTERACTING KINASE 2 477 584 - -
Dere13g0180 780 Pfam Leucine rich repeat N-terminal domain 122 162 IPR013210 -
Dere13g0180 780 Pfam Protein tyrosine and serine/threonine kinase 510 771 IPR001245 GO:0004672|GO:0006468
Dere13g0180 780 Gene3D Transferase(Phosphotransferase) domain 1 585 779 - -
Dere13g0180 780 MobiDBLite consensus disorder prediction 435 458 - -
Dere13g0180 780 SUPERFAMILY Protein kinase-like (PK-like) 485 772 IPR011009 -
Dere13g0180 780 Gene3D Ribonuclease Inhibitor 234 396 IPR032675 -
Dere13g0180 780 FunFam Protein NSP-INTERACTING KINASE 2 585 775 - -
Dere13g0180 780 Gene3D Phosphorylase Kinase; domain 1 474 584 - -
Dere13g0180 780 CDD STKc_IRAK 512 772 - -
Dere13g0180 780 FunFam Protein NSP-INTERACTING KINASE 2 121 270 - -
Dere13g0180 780 SMART LRR_typ_2 308 331 IPR003591 -
Dere13g0180 780 SMART LRR_typ_2 188 212 IPR003591 -
Dere13g0180 780 SMART LRR_typ_2 236 260 IPR003591 -
Dere13g0180 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 387 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0180 Dere-ChrDere13 2871221 2876543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0180 103 619 Miscellaneous Gene Families AT4G22730 58.444 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Dere13g0180 PK_Tyr_Ser-Thr 1.3e-33 CL0016