Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0169 ATGGAGGTCAGGGACGGTGTTAATAGTGAAGTCACGGTGGTCCGATCAGATGCTCCGTCGGACTACCATGTAGCCCCAAGGACTGAAGAACCGTCTTACACCGGTGGATCAACGGCGCTGATGCATCAAGGGAGTGTTCCGCCACTGGAGCCGGCTGCAATAGGGGTAGCGCCGGCAGCCACAACTTTACCGGTGAAGAAGAAGAGGGGTCGGCCGAGAAAGTACGGGCCAGACGGGTCGGTAACTATGGCGCTATCTCCGATGCCGATATCTTCTTCAGCTCCGCCGTCAGTAATCGATTTCTCGGCGGGGAAACGCGGCAAAGTGCGGCCAGCTAGCTCAGTGAGCAAAGCCAAATTCCAAGTGGAAAATTTAGGTGAATGGGTTGCTTGCTCTGTTGGTACTAATTTTACGCCCCATATCATTACTGTTAATTCTGGGGAGGACGTTACCATGAAGATAATATCATTTTCTCAGCAAGGGCCAAGAACTATATGCGTTCTTTCTGCAAATGGAGTCATATCAAGTGTCACACTTCGTCAGCCTGATTCTTCTGGGGGAACATTGACATATGAGGGACGGTTTGAAATTCTGTCATTATCTGGCTCATTTGTGCCAAATGAAAGTGGAGGAACAAGAAGCAGATCTGGCGGCATGAGTGTTTCTTTAGCAGGTCCAGATGGACGTGTTGTAGGGGGTGGAGTGGCTGGTCTTTTGGTAGCTGCAAGTCCTGTGCAGGTTGTGGTGGGCAGTTTTCTGGCAGGAAATCAGCATGATCTGAAGACAAAGAAACAGAAACATGAGATTGTATCAACTGCCTCACCAACAGCTGCTGTTCCCTTGTCTACTGCTGATCCAATACCTAATTTTTCATCTTCATCTTCCTTCCTCGGTGATAATAATTGGTCTGCATTGCCATCAGATACAAGGAATAATAAGCCAACTGACATTAATGTGTCCCTGCCTGCAGGGTAA 975 0.4882 MEVRDGVNSEVTVVRSDAPSDYHVAPRTEEPSYTGGSTALMHQGSVPPLEPAAIGVAPAATTLPVKKKRGRPRKYGPDGSVTMALSPMPISSSAPPSVIDFSAGKRGKVRPASSVSKAKFQVENLGEWVACSVGTNFTPHIITVNSGEDVTMKIISFSQQGPRTICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFVPNESGGTRSRSGGMSVSLAGPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHDLKTKKQKHEIVSTASPTAAVPLSTADPIPNFSSSSSFLGDNNWSALPSDTRNNKPTDINVSLPAG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0169 324 CDD DUF296 138 229 IPR005175 -
Dere13g0169 324 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 255 - -
Dere13g0169 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 303 IPR039605 GO:0003680
Dere13g0169 324 FunFam AT-hook motif nuclear-localized protein 1-like 139 270 - -
Dere13g0169 324 Gene3D - 139 272 - -
Dere13g0169 324 ProSiteProfiles PPC domain profile profile. 134 276 IPR005175 -
Dere13g0169 324 MobiDBLite consensus disorder prediction 290 324 - -
Dere13g0169 324 MobiDBLite consensus disorder prediction 16 46 - -
Dere13g0169 324 MobiDBLite consensus disorder prediction 290 318 - -
Dere13g0169 324 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0169 Dere-ChrDere13 2776198 2780591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0169 6 321 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 62.865 1.24e-129 372