Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0162 ATGTACAGAGTTACACAAAAGCTCACAAAGCAAGCTGGTGATCATAAATTTAGCATCTCATCAGAATTTCAACATTTCAAGTCGCTTTCACTTGGAGAGTTCTGGAACACCACAGAGATGGCTCTCCAATCTCCACTGCTTTATAGCATCCTCTACACAAAAATTACCGCCTCACCTGTGGGCTGTGGCAGGCCCTCTGTTATGAGAAACATGAATCCTCAACATTACGATGAGCCGATGCCATGCGCCAACAACTGTGGCTTCTTCGGAGCCCCTGCCACCACGAACCTCTACTCTAAATGTTACAGAGACTTCCGTATCAAACAGGAACAGGCTGAGGCAGAAGCCGCTTCCGCTAAAGCTGCCGTCGAGGAAGCCTCGTCGACGGTTGTCGGTGGTGGAGATCAAGTGGCCGAGAAGGCAGTGAGCCGGTGTTGGAGTTGTAAGAAGAAGGTGGGTTTGACGGGAGTGAGGTGCAAGTGCGGTGGGACTTTCTGCGGGAAACATCGTTATCCGGAGATGCATGAGTGTAAGTTTGATTTCAAGCTTGCTGGCTGCAATGTGATAGCCAAGCGTAATCCTCTGTTTAAAGCCGATAAGCTGAATAGGTTTTAG 615 0.4894 MYRVTQKLTKQAGDHKFSISSEFQHFKSLSLGEFWNTTEMALQSPLLYSILYTKITASPVGCGRPSVMRNMNPQHYDEPMPCANNCGFFGAPATTNLYSKCYRDFRIKQEQAEAEAASAKAAVEEASSTVVGGGDQVAEKAVSRCWSCKKKVGLTGVRCKCGGTFCGKHRYPEMHECKFDFKLAGCNVIAKRNPLFKADKLNRF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0162 204 PANTHER AN1-TYPE ZINC FINGER PROTEIN 78 203 - -
Dere13g0162 204 Pfam AN1-like Zinc finger 145 181 IPR000058 GO:0008270
Dere13g0162 204 Pfam A20-like zinc finger 80 103 IPR002653 GO:0003677|GO:0008270
Dere13g0162 204 Coils Coil 102 129 - -
Dere13g0162 204 SUPERFAMILY AN1-like Zinc finger 136 199 IPR035896 -
Dere13g0162 204 ProSiteProfiles Zinc finger AN1-type profile. 139 185 IPR000058 GO:0008270
Dere13g0162 204 SMART A20_3 79 103 IPR002653 GO:0003677|GO:0008270
Dere13g0162 204 ProSiteProfiles Zinc finger A20-type profile. 76 110 IPR002653 GO:0003677|GO:0008270
Dere13g0162 204 SMART AN1_Zf_4 145 182 IPR000058 GO:0008270
Dere13g0162 204 Gene3D - 134 188 IPR035896 -
Dere13g0162 204 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 82 117 - -
Dere13g0162 204 Gene3D - 68 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0162 Dere-ChrDere13 2691525 2692285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0162 82 204 C2H2 Transcription Factor Family AT3G52800 38.710 2.59e-27 100