Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0159 ATGAGAAGGGCCGGTCAAATTCGCCTCTCTGATCATGTTCTGTTGTTCGCCATTCTTCTTTTACTTTCATCTTTCACAGTCTCTCCAATATCTGAAAAGGAAGTTCTGCTTCAATTCAAGGGAAATATCACAGATGATCCCTACAACAGCTTGAGTTCATGGGTATTAAGTGGAAGTCCATGCGAAGATTACATGGGTGTTTCCTGTAATTCAGGAGGATTTGTAGAAAAAGTCGTTCTTTGGAACACCAGCTTAGCTGGAGTATTGTCGCCAGCACTGTCACGGTTAAAATCGTTAAAGATTTTGTCATTGTTCGGGAATCGTTTTTCTGGTAAAATCCCAGAAGAATATGCTGAGTTTCGATCATTATGGAAGATGAATTTGAGCTCCAATGCGTTTTCTGGTTCAATCCCGGAGTTCATAGGTAATATACAGAGCATTCGCTTTCTTGATTTGTCACTCAATGGCTTCTCTGGGGAGATACCATCAGCTTTGTTCAAATACTGCTACAAAACCAAGTTCGTCTCTCTTTCTCATAACAATCTATCAGGTTCCATTCCAGCCTCCTTAGTGAATTGCTCGAATCTTGAAGGGTTTGATTTTTCTTTCAACAATGTAAGTGGGAATATTCCTATGAGACTTTGTGATATTCCCAGATTATCCTATGTATCATTAAGAAGCAATGCCTTATCAGGGAGTATGCAAGATCAGATTTTTTCGGAATGTCAAAGTTTGGTACATTTAAATCTTGGTAGTAATACTTTCAGTGGTTCTGCTCCATTCAACATCCTTGGAATGAAAAATCTTACTTATTTCAATATATCGTATAATGGGTTTAGTGGAAAAATTCCTCAGATGATTACATGTAGTGAGAAATTAGAATTTTTGGATGGTTCAGGAAATGATTTGGATGGGGAGATTTCAATGAGCATAACAAGATGCAAGAACCTCAAGCTTTTGGCCTTGGAGTTAAATAGGCTGAAAGGGAGTATCCCATTAGGAATTCTGGAAATGGAGAGGCTATTAGTTATTAAATTGGGTGATAATTCAATAGGAGGAATAATTCCCAAGGGTTTTGGCAACATTGAGCTGCTTGAAGTTCTGGATTTGCACAATCTAAACCTCACTGGTGAAATTCCAATTGATGTAAGCAATTGCAGGTTTCTTCTTGAGTTGAATTTGTCTGGTAATAACTTAGAAGGAGAGGTTCCTCAGACTCTTTACAACATGACAAACCTGGAGGTCCTCGACCTTCATCAAAACCAGCTCAACGGAAGCATCCCACCAAGCTTAGGAAATTCATCAAGTATTCAATACCTAGATTTGTCACATAATTCGCTTTCTGGTTCAATCCCATCTTCCCTTGGAAATTTAAAATACTTGACACATTTTAATCTGTCATTCAACAATCTCTCTGGTGTCATTCCTCCTATGGCAACCATACAGGGTTTTGGTTCATCTGCATTTTCCAATAACCCTTTTCTCTGTGGTTCTCCTCTGGATGACACCTCTTGCTCAGCAAATGGCATTAGATCACCTTCAGCTTCTGGGACGATTAAAGTGCTAAGTGTCTCTGCAATTGTTGTTATTGTTGCTGCAGCTGTCATTCTTGCCGGGGTTTGTTTGGTGACCATCTTGAATACTAAGGCTCATTACAGAAAGAAAGAAGATCAGATGATGATTGTTGAGAGCACACCTCTAGGATCAACAGAATCAAATGTTATAATTGGAAAGCTGGTTCTCTTCAATAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGAACCAAAGCATTGCTTGACAAAGAGGCTTTGATTGGCGGTGGATCAATAGGTACAGTGTATAGAACTGCGTTTGAAGGTGGGGTCTCAGTTGCAGTGAAAAAGCTTGAAACTTTGGGAAGGATCAGAAACCAGGATGAATTTGAACATGAAATAGTTCGGTTAGGCAACCTTAAACACCCAAATTTAGTTGCTTTTCAAGGCTACTATTGGTCCCCAACAATGCAAATGATCATATCAGAGTTTGTCCCAAATGGGAATCTCTTTGATAATCTACACAGTACTAGCAGTGGCAGTAGGGAACAACTATACTGGTCTAGAAGGTTACAAATTGCACTTGGAACAGCAAGAGCCCTTGCCTATCTTCACCATGACTGTCAACCTCCAATTCTCCATCTCAACATCAAATCCTCCAACATACTCTTAGATGACAAGTATGAAGTTAAGTTATCAGATTATGGCCTAAAGAAGTTACTTCCTATTTTGGACAATAAAGGCGCCACCAAATTCCACAATGCCGTAGGATACGTTGCCCCAGAGTTGGCTCAGAGTTTAAGGCTGACGGAGAAATGTGATGTTTATAGCTTTGGGGTGATTCTTTTGGAGCTGGTCACAGGAAGGAAGCCTGTAGAAAGTGTAGCAACAAATCAAGTGGTGGTGTTGTGTGAGTATGTCAGAGGGATGTTGGAGAGTGGTTCAGCTTCAGATTGTTTTGACGGAAGATTGATGGGCTCGGTGGAAAGTGAATTTATTCAGGTTATGAGAATGGGACTAATTTGCACGTCAGAGGATCCATCTAAGAGACCAAGCATGGCTGAGATTGTCCAGGTCCTTGAGTCTTCTATCGGAATTGAATCAGAATCACATTAA 2655 0.4 MRRAGQIRLSDHVLLFAILLLLSSFTVSPISEKEVLLQFKGNITDDPYNSLSSWVLSGSPCEDYMGVSCNSGGFVEKVVLWNTSLAGVLSPALSRLKSLKILSLFGNRFSGKIPEEYAEFRSLWKMNLSSNAFSGSIPEFIGNIQSIRFLDLSLNGFSGEIPSALFKYCYKTKFVSLSHNNLSGSIPASLVNCSNLEGFDFSFNNVSGNIPMRLCDIPRLSYVSLRSNALSGSMQDQIFSECQSLVHLNLGSNTFSGSAPFNILGMKNLTYFNISYNGFSGKIPQMITCSEKLEFLDGSGNDLDGEISMSITRCKNLKLLALELNRLKGSIPLGILEMERLLVIKLGDNSIGGIIPKGFGNIELLEVLDLHNLNLTGEIPIDVSNCRFLLELNLSGNNLEGEVPQTLYNMTNLEVLDLHQNQLNGSIPPSLGNSSSIQYLDLSHNSLSGSIPSSLGNLKYLTHFNLSFNNLSGVIPPMATIQGFGSSAFSNNPFLCGSPLDDTSCSANGIRSPSASGTIKVLSVSAIVVIVAAAVILAGVCLVTILNTKAHYRKKEDQMMIVESTPLGSTESNVIIGKLVLFNKSLPSKYEDWEAGTKALLDKEALIGGGSIGTVYRTAFEGGVSVAVKKLETLGRIRNQDEFEHEIVRLGNLKHPNLVAFQGYYWSPTMQMIISEFVPNGNLFDNLHSTSSGSREQLYWSRRLQIALGTARALAYLHHDCQPPILHLNIKSSNILLDDKYEVKLSDYGLKKLLPILDNKGATKFHNAVGYVAPELAQSLRLTEKCDVYSFGVILLELVTGRKPVESVATNQVVVLCEYVRGMLESGSASDCFDGRLMGSVESEFIQVMRMGLICTSEDPSKRPSMAEIVQVLESSIGIESESH 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0159 884 FunFam Putative LRR receptor-like serine/threonine-protein kinase 578 677 - -
Dere13g0159 884 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Dere13g0159 884 ProSiteProfiles Protein kinase domain profile. 601 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0159 884 Gene3D Ribonuclease Inhibitor 173 508 IPR032675 -
Dere13g0159 884 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 29 167 - -
Dere13g0159 884 SUPERFAMILY L domain-like 167 501 - -
Dere13g0159 884 CDD STKc_IRAK 607 874 - -
Dere13g0159 884 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 168 508 - -
Dere13g0159 884 SUPERFAMILY Protein kinase-like (PK-like) 603 873 IPR011009 -
Dere13g0159 884 Pfam Leucine rich repeat 391 447 IPR001611 GO:0005515
Dere13g0159 884 Gene3D Phosphorylase Kinase; domain 1 601 681 - -
Dere13g0159 884 Pfam Protein kinase domain 603 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g0159 884 SUPERFAMILY L domain-like 78 211 - -
Dere13g0159 884 Gene3D Ribonuclease Inhibitor 30 169 IPR032675 -
Dere13g0159 884 Gene3D Transferase(Phosphotransferase) domain 1 682 882 - -
Dere13g0159 884 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 80 405 - -
Dere13g0159 884 FunFam Putative LRR receptor-like serine/threonine-protein kinase 679 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0159 Dere-ChrDere13 2667049 2669792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0159 24 874 Receptor kinase-like Gene Family AT1G62950 63.437 0.0 1083
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dere13g0159 Pkinase 2.2e-39 CL0016