Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0155 ATGGATTATACGTTTCAATTAATGAACCACACAGGGGATCAATTCCCAGATTTCAATGAAGACGATGACATTGATCATCCTAGTGAACTCAAGAAGAGGAAGATCATCCACAGGGATATAGAAAGACAACGAAGACAAGACATGGCCGCTCTCTATACTTCTGTAAGATCACTGCTCCCACCTGAATACATGAAGGGAAGGCGTTCGATATCAGATCACATGCTGGAGGCAGTGAATTACATCAAGCATCCTCAGAACAAGAAGGAGGAACTAAGTAACAAGAGAGATAGGCTGAAAAAATTAAGCAAACCTAGCTTTAACAATCAAGGAATAATGTGTGATGTTGTGACTGTTAGAAGCTGTTGGGGAGGAATTGAGGTTGTCATAAACACCGGAATTGAAGAAGGGCTTCCTCTCTCAAGAGTGCTGCAACTTCTAATCAGAGAAGGGCTTTGTGTTATCACTTGCAATTCCACTAAAGTAAAAGATAGATTATGTCACACTGTTGAATCCGAGGTTGGTACTTGACGTGAACATGTTAAAACTAAATTATTTGGGAAGCAGCTAGCGGTTTACACAACTGATACATTTAAGCTAACGAAACGGATTAATTAA 615 0.3984 MDYTFQLMNHTGDQFPDFNEDDDIDHPSELKKRKIIHRDIERQRRQDMAALYTSVRSLLPPEYMKGRRSISDHMLEAVNYIKHPQNKKEELSNKRDRLKKLSKPSFNNQGIMCDVVTVRSCWGGIEVVINTGIEEGLPLSRVLQLLIREGLCVITCNSTKVKDRLCHTVESEVGTXREHVKTKLFGKQLAVYTTDTFKLTKRIN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0155 204 CDD bHLH_AtORG2_like 33 102 - -
Dere13g0155 204 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 32 84 IPR011598 GO:0046983
Dere13g0155 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 100 IPR036638 GO:0046983
Dere13g0155 204 Pfam Helix-loop-helix DNA-binding domain 34 83 IPR011598 GO:0046983
Dere13g0155 204 Gene3D - 25 108 IPR036638 GO:0046983
Dere13g0155 204 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 31 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0155 Dere-ChrDere13 2642327 2645041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0155 34 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 46.053 9.57e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere13g0155 HLH 2.8e-06 No_clan