Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0143 ATGGCGTCGTGTCGGGAACATGAGAAGGATCAAGACGACGATGGAGGAGCATCGGACCTCAGCAACATGGCCGGTGAGACAGAACGAGACCCTGCAACTGCCAGCATCAACTACGTGGGTACAAGTCATGCGACGGCGTTTCAAGTGTTGCCCTTGAAGGACGAGCCGATTGATTCGGACTCGGACCAGAAGAGTGAGGCACCTCCAGTTGGGATTGTTCCGGTGCCGATGCATATGCAGACGTCAATGCACATGCCGGCGACGACAACTCGACGGTCGTCTACCAAGGACCGCCACACCAAGGTGGAAGGTCGGGGACGAAGGATTCGTATACCCGCCACGTGTGCGGCTCGGATCTTTCAGCTCACTCGGGAGTTAGGTCACAAGTCCGACGGTGAAACCGTACGGTGGCTTCTCGAACACGCCGAGCAGGCCATCATAGAGGCCACCGGAACGGGCACTGTTCCGGCCATCGCTGTCTCTGTTGGCGGAACTCTCAAAATTCCCACAACGTCCAGCAACTCCGATGCCGAAACTACCAAGAAGCGGAAACGGCCGTCTAATAGCGAGTTCGTTGACTTAAACGACGCCGTTTCACAGTCTTTCGGGTTGGCGCCGATTCAACCCGCGGTTCAACAAGGTCTAGTTCCGGTCTGGGCAGTGGGAAACACCGGTATGATGGTCCCGGCGAACGCTTTTTGGATGATCCCGCCGGGAACGACGACGTCGACGCCGTTGGCTACTGGAGCTGCTGTGCCGTTCAACCAGCAACCCCAGATATGGGCATTTTCTCCACCAGTGACTCCCGTATTCAACATGCCGGCAAGGCCCATGTCCTCTTTCGTGGCAACAACAAATATCCCAACCGGCGTAGAAGTTTCCGGTAATAGGTCTAACTCAGGCGTGAGTACTAGCACGGCGGGACCGAAGGTGGCGAACGCTTCGACGATGGCACCAAGTGTTCGTTCCGGTGAGACTGTCAGTGGTAGCAAGGCTCAGATGTTGAGGGATTTTTCATTGGAGATTTACGATAAGCAAGAGTTGCAGTTGATGGGGCGACCAGGGAATCAACCAGCGCAAGCTTCAGAACAATGA 1095 0.558 MASCREHEKDQDDDGGASDLSNMAGETERDPATASINYVGTSHATAFQVLPLKDEPIDSDSDQKSEAPPVGIVPVPMHMQTSMHMPATTTRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSNSDAETTKKRKRPSNSEFVDLNDAVSQSFGLAPIQPAVQQGLVPVWAVGNTGMMVPANAFWMIPPGTTTSTPLATGAAVPFNQQPQIWAFSPPVTPVFNMPARPMSSFVATTNIPTGVEVSGNRSNSGVSTSTAGPKVANASTMAPSVRSGETVSGSKAQMLRDFSLEIYDKQELQLMGRPGNQPAQASEQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0143 364 MobiDBLite consensus disorder prediction 1 37 - -
Dere13g0143 364 MobiDBLite consensus disorder prediction 292 329 - -
Dere13g0143 364 ProSiteProfiles TCP domain profile. 95 149 IPR017887 -
Dere13g0143 364 MobiDBLite consensus disorder prediction 55 74 - -
Dere13g0143 364 MobiDBLite consensus disorder prediction 1 16 - -
Dere13g0143 364 Pfam TCP family transcription factor 94 176 IPR017887 -
Dere13g0143 364 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 61 343 IPR005333 GO:0003700
Dere13g0143 364 MobiDBLite consensus disorder prediction 167 188 - -
Dere13g0143 364 MobiDBLite consensus disorder prediction 84 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0143 Dere-ChrDere13 2553873 2554967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0143 91 349 TCP Transcription Factor Family AT2G45680 48.630 2.23e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere13g0143 TCP 2.2e-28 No_clan