Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0130 ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCACCGAGGCATAGATTGAGGAGTGAAGCATCTGCACAGTTCCAAGCCAGCCATTTCCAGTTGCCTTCAATGAGCACGCAGAGACTGGACTTGCCATGTAGCTTCCCGCGCAAGGACAACAACAGCTCGCGTTCGCAGCCCTTGAGGCCCGTGGGCCTTTCGGTGGAGAAGAAGCCCGTAGAGCCGAAGCCCAAGACCACCACTTGTTCTCTCAAGCAGAACATCCGACTTCCACCATTGGCAACGACCACTCAAGCCACAAATGCTCAGAAGAACGAGTTTTGGGAGAAAGGTAAGAGCTTGAAGAGGCTTGCAGAACAGGATGAGTCCTTCACTAGAAGAGCCAAGAGGATAAAGGGTATAATCGGTAACAATGAAAATGCCGATGATGTTCGAGAAATCCAAATGGGTACTGCTGGAAACTTTTGGTTAAATAGCACTTCGATTCCTTTCTCTCTGACTTGTTCTGGAGAAGAAGAAGAAGAAAGGGTGTGTTTTGTGCCTTCTGAAGTTGTCTCTGCACCGTGGGTGGATTCAATTGTGACTAAGATCACAAATTTGGGCGAGAAGGGCGTTGAGGGAAGCAATCTACCAACAAAGGAGGCGTCAGCATCGAACACTTCATCAGAAAGTCAAAGCTTGAGCCTGAGGTTGAACGAGAACGACTCAGAACACGAAGGAGTGGGTAACGGAAGATCAGAGAATCCTTATCACCATGATGGAACAAAGGTGGAAACAGGGGATGAAGAAAATCAAGAGGAGCATCGAGGATTTGAGCTTGTGAGCTTTCTTACAGCTTGCGTTGATGCTATTGGTTCAAAGAATGTTGCTGCGGTCAATTGTTTCATAGCGAAGTTGGGTGATCTCGCGTCTCCAAGAGGAAGAACATCTATAAGCCGTGTTTGTGCTTATTTCACCGAAGCTTTAGCTGTCCGTGTCACAAGAATTTGGCCTCACATTTTTCACATTACCACACCTCGAGAGCTAGATAGGGTGGAAGATGAAGCTGGAACTGCATTAAGACTTTTAAACCAGGTCAGCCCAGTTCCAAAGTTTCTTCATTTCACGTCAAATGAGATCCTATTGAGGGCTTTCGAAGGAAAAGAAAGGGTTCACATCATAGATTTCGACATCAAGCAAGGGCTTCAATGGCCCAGCTTGTTCCAGAGTTTAGCTTCGAGGACTAATCCCCCATCCCACGTAAGAATCACGGGTATAGGAGAGTCCAAGCAAGAGCTGAATGAAACAGGAGATCGGCTTGCTGGGTTTGCTCAAGCATTGAACCTTCCCTTTGAGTTTCACCCTGTAGTGGACAGGCTGGAAGATGTGAGGCTATGGATGCTTCACGTGAAGGAACATGAAAGTGTGGCTGTTAATTGTGTTTTCCAACTCCACAAGACACTTTACGATGGGAGTGGAGGAGCGCTGAGGGATTTTCTGGGTCTCATACGAAGCACAAATCCTAGTATCGTCCTTGTGGCAGAGCAAGAGGCAGAACACAACGGAGTTAGATTGGAAACAAGGGTGTGCAATTCGTTGAAGTACTATTCTGCTCTGTTTGATTCAATTGACCATTGTCTTCCGCAAGACACACCTGTGAGGAATAAGATAGAGGAGATGTACGCTTGGGAGATAAGGAACATTATTGCTTGCGAGGGAAGGGAGAGAGTGGAGAGGCACGAGAGCTTTGAGAAATGGAGGAAGATGATGGAACAAGGTGGGTTTCGAAGCATGGGAATTAGTGAGAGGGAAATGAGTCAGAGCCAAATGTTGTTGAAGATGTATGCTTGTGAGAATTACAATGTGAAGAAGGAGGAAGAAGGAGGAGCAGAAGCAATAACACTGGGTTGGCTAGAGCAGCCTCTGTATACAGTGTCAGCATGGGCACCAGTTGATGCAGCAGCAGGCAGCCCGTCCTCTTATTCTCAGCCATGA 1968 0.4705 MLAGCSSSTLLSPRHRLRSEASAQFQASHFQLPSMSTQRLDLPCSFPRKDNNSSRSQPLRPVGLSVEKKPVEPKPKTTTCSLKQNIRLPPLATTTQATNAQKNEFWEKGKSLKRLAEQDESFTRRAKRIKGIIGNNENADDVREIQMGTAGNFWLNSTSIPFSLTCSGEEEEERVCFVPSEVVSAPWVDSIVTKITNLGEKGVEGSNLPTKEASASNTSSESQSLSLRLNENDSEHEGVGNGRSENPYHHDGTKVETGDEENQEEHRGFELVSFLTACVDAIGSKNVAAVNCFIAKLGDLASPRGRTSISRVCAYFTEALAVRVTRIWPHIFHITTPRELDRVEDEAGTALRLLNQVSPVPKFLHFTSNEILLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAQALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCVFQLHKTLYDGSGGALRDFLGLIRSTNPSIVLVAEQEAEHNGVRLETRVCNSLKYYSALFDSIDHCLPQDTPVRNKIEEMYAWEIRNIIACEGRERVERHESFEKWRKMMEQGGFRSMGISEREMSQSQMLLKMYACENYNVKKEEEGGAEAITLGWLEQPLYTVSAWAPVDAAAGSPSSYSQP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0130 655 MobiDBLite consensus disorder prediction 41 78 - -
Dere13g0130 655 MobiDBLite consensus disorder prediction 41 60 - -
Dere13g0130 655 Pfam GRAS domain family 271 639 IPR005202 -
Dere13g0130 655 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 221 636 IPR005202 -
Dere13g0130 655 ProSiteProfiles GRAS family profile. 262 640 IPR005202 -
Dere13g0130 655 MobiDBLite consensus disorder prediction 201 263 - -
Dere13g0130 655 MobiDBLite consensus disorder prediction 209 229 - -
Dere13g0130 655 MobiDBLite consensus disorder prediction 230 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0130 Dere-ChrDere13 2430474 2432441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0130 1 639 GRAS Transcription Factor Family AT1G63100 58.884 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere13g0130 GRAS 5.2e-129 CL0063