Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0128 ATGGGCAAGGCCTCGAAATGGTTTCGCGCTATTTTCGGTCTAAAGAAGCCTGACTCGTCGTCGTCTTTCTCCACGGTCTCTGCGTCAAAGCCGTCCAAAGACAAACGCCGATGGAGCTTCGTCAAATCTTACGGGGAATCCACCACTACCAAACCCACCGACCACCACACAACGTTCAGGGAGGAGGCGATTCAACCGTCCGGACACATTGACGGCGTGTATCCTGACAAGCACGCAATAACGGTGGCTGCCGCTACCGCCGCCGTTGCGGAGGCTGCGGTGGCTGCTGCTCAGGCCGCCGCCGCCGTTGTCAGGCTCACAAGCAGCGGTAGGTGCCCTGGAGGCATCGGGACTCGTGAAGAATGGGCGGCCATCAAGATTCAAGCCGCTTTTCGAGGCTGTTTGGCGAGGAGAGCCCTACGAGCATTAAAAGGATTGGTGAAGCTCCAGGCATTGGTGAGAGGTCACATTGAGAGGAAACGTACAGCAGAGTGGCTGCAAAGAATGCAAGCTCTTGTTCGAGCACAGGCACGAGTTCGTGCAGGACGGATCCAAATTCTGCAGACCCCACTTTCGAATTCTAAATCATCTAACGCCCACCTCCATGGTCCTGCAACGCCAGACAAATTTGAAAGCCCAATCAGATCCAAGAGCATGAAATTTGATCAGTCATCGTTACTCAAGAGAAATGGGTCCAAATCGCATTTCCAGATCCATGGGAATCAAGAGAAATGTTGGAATAGATCTGATAGTCGGACAGACGAAGAGTCATGGAATCAACGGAGATATTCGATGAGAACTAGTGGGGGTGACGATGAAAGAAGCATCAGGATTCTTGAGATTGATTCTGGAAAATCACATTTCCCACCAAAGCGCAGAAACCTCTTTCACTCCACTAACCATACTTTGGTATGTGATAATTATAGTCAAAGTTTGTCCACCGCAAAGGACTCTAAAACTCATCAATCAGGTCAGAGTACATCTTCCTGTGAAGTTCAATCTTACAGTCCGCTAAAAGTCGACGAGGTTGTGGATAGTCCTCAGCTCTTTTTGGCATCCTCAAGGGACTGTGGCCTCAAAAGTAGTCCTCTTACTCCTTCCAGGAGTGACGACTCAAGAAGCTATTTGAGTGGTTATTCTGACCACCCAAGCTACATGGCTTACACTGAATCTTCAAAGGCAAAGGTCAGATCTCTGAGTGCTCCAAAGCAAAGGCCTCAATATGAGAGGTCTAGTTCATCTAATAGGTACACGGTTCAAGTTGGCGAATCAAGATTGGCCACACAGAAGGCAACTGCATTGCATGCAAACTTCACTAACAAAGCCTATCCAGGTTCTGGTCGTTTGGACAAGTATGGTATGCCAATGGGGTATAGATGCTGA 1383 0.4924 MGKASKWFRAIFGLKKPDSSSSFSTVSASKPSKDKRRWSFVKSYGESTTTKPTDHHTTFREEAIQPSGHIDGVYPDKHAITVAAATAAVAEAAVAAAQAAAAVVRLTSSGRCPGGIGTREEWAAIKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAEWLQRMQALVRAQARVRAGRIQILQTPLSNSKSSNAHLHGPATPDKFESPIRSKSMKFDQSSLLKRNGSKSHFQIHGNQEKCWNRSDSRTDEESWNQRRYSMRTSGGDDERSIRILEIDSGKSHFPPKRRNLFHSTNHTLVCDNYSQSLSTAKDSKTHQSGQSTSSCEVQSYSPLKVDEVVDSPQLFLASSRDCGLKSSPLTPSRSDDSRSYLSGYSDHPSYMAYTESSKAKVRSLSAPKQRPQYERSSSSNRYTVQVGESRLATQKATALHANFTNKAYPGSGRLDKYGMPMGYRC 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0128 460 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Dere13g0128 460 PANTHER IQ-DOMAIN 5-RELATED 1 415 - -
Dere13g0128 460 MobiDBLite consensus disorder prediction 358 376 - -
Dere13g0128 460 SMART iq_5 142 163 IPR000048 GO:0005515
Dere13g0128 460 SMART iq_5 119 141 IPR000048 GO:0005515
Dere13g0128 460 Gene3D - 119 162 - -
Dere13g0128 460 MobiDBLite consensus disorder prediction 247 272 - -
Dere13g0128 460 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Dere13g0128 460 MobiDBLite consensus disorder prediction 396 419 - -
Dere13g0128 460 MobiDBLite consensus disorder prediction 357 376 - -
Dere13g0128 460 MobiDBLite consensus disorder prediction 193 213 - -
Dere13g0128 460 Pfam Protein of unknown function (DUF4005) 362 417 IPR025064 -
Dere13g0128 460 MobiDBLite consensus disorder prediction 16 35 - -
Dere13g0128 460 Pfam IQ calmodulin-binding motif 122 141 IPR000048 GO:0005515
Dere13g0128 460 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0128 Dere-ChrDere13 2384824 2388556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0128 1 459 IQD Protein Family AT4G23060 43.810 2.31e-77 248