Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0106 ATGTCCCTTGGAGCTATAATCACCACTACCAACCCTCTCAACACTACTGGCGAAATTGCCAAGCAAATCTTGGATTCTAAACTGATCATCGCTTTCACAATTCGGCCTCTCTTTCCCAAAATCACCGCAATTTCAAACATACCAATAGTTCTCATGGACAAAGATACAACCACCCCGATTATCGAACCCAAAATATTGACTACGCTAAGGGAGATGATGAAGAAGGAACCCAGTGTGAGCCGAGTTAGGGATCGAGTTAACCAAGATGATACGGCGACGCTGTTATACTCGTATGGTACCACGGGTCCAACGATTGCAACGGGTCTTCTGGCTTCGGGATCAACTATAGTGGTGTTATCCAAGTTCGACATGGACGACATGCTTTTAGCAATCCAGAGGTACCGTGCAACATACCTACTGCTGGTCCCGCCCATACTTATGGCGATGATAAACAGAGTTGATGCGATAAAGGCGAAGTACAACTTGAGTTCACTACATTCGGTGCTGTCAGGTGGGGCTCCACTGAGTAAGGAGGTGATAGAGGGGTTTGTGGAGAAGTACCCTCATGTGACAATTCTTCAGGGTTACGGGTTAACCGAATCAACAGGGGTTAGGGCATCCATGGACTTGTTGGAGGAGAGTAGGAGTAACCAGGAAGCAACTACCTCAACCCTTGATTTAGAGGGATGGTTAAGTATACGGGATATTTGCTATATTGATAATGATGGACATATCTTCATCGTCGATAGGTTGAAAGAACTCATTAAGTACAAGAGATATCAGGTCCCACCAGCAGAACTCGAGGCCTTGTTGCTTACTCATCCTGCAATTCCTGATGCTGCTGTCATACCATTCCCAGACAAGGAGGTTGGGTAG 876 0.4612 MSLGAIITTTNPLNTTGEIAKQILDSKLIIAFTIRPLFPKITAISNIPIVLMDKDTTTPIIEPKILTTLREMMKKEPSVSRVRDRVNQDDTATLLYSYGTTGPTIATGLLASGSTIVVLSKFDMDDMLLAIQRYRATYLLLVPPILMAMINRVDAIKAKYNLSSLHSVLSGGAPLSKEVIEGFVEKYPHVTILQGYGLTESTGVRASMDLLEESRSNQEATTSTLDLEGWLSIRDICYIDNDGHIFIVDRLKELIKYKRYQVPPAELEALLLTHPAIPDAAVIPFPDKEVG 291
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0106 291 Gene3D - 251 291 IPR045851 -
Dere13g0106 291 Pfam AMP-binding enzyme 108 206 IPR000873 -
Dere13g0106 291 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 106 209 - -
Dere13g0106 291 Gene3D - 104 215 IPR042099 -
Dere13g0106 291 Gene3D Luciferase; Domain 3 216 250 - -
Dere13g0106 291 Gene3D - 1 103 - -
Dere13g0106 291 SUPERFAMILY Acetyl-CoA synthetase-like 2 289 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere13g0106 Dere-ChrDere13 2187619 2188758 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0106 1 291 Monolignol Biosynthesis Gene Families AT1G20500 48.285 9.38e-108 322