Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0085 ATGCTTGATATTCAGAATAAGTATTATTTCCTTGACTTGCACACACTTGGGATTTGGAATTCTACCCAACCAAATGGGTTGGTTGTTCCTGATGCAAGTTTGCACTCTGTGAATTCAATGACGGATGTGCTGGAGTTGATGAATGTGGGATTAATGAATCGGGCAACTAGTTCCACAGCATTAAATGAAAGAAGTAGCAGATCACATAGTGTTCTCACAGTTCATGTTCGTGGCACGGATTTGGAGACCAACACTTTATTGCGTGGATGTCTACATCTTGTAGATCTTGCAGGGAGTGAGAGAGTGGAACGTTCTGAAGCAACAGGGGACAGGCTTAAGGAGGCACAACATATAAACAAATCACTATCAGCACTTGGAGATGTCATTTTTGCTCTAGCACAAAAGAGTCCACATGTTCCGTATAGAAATAGTAAATTGACTCAACTTCTTCAGAGTTCGTTAGGTGGTCAAGCAAAAACCCTCATGTTTGTACAGCTTAATCCTGACATTGCTTCATATTCTGAAACAATAAGCACCTTGAAGTTTGCTGTAAGGGTTTCTGGTGTTGAGTTGGGTGCTGCTCGCAGTAATAGAGAGGGAAGGGATGTCAGAGAACTCATGGAGCAGGTAGCATCTCTCAAGGATGCACTTGCAAGGAAGGATGAAGAGATTGAGCGGTTGCAGCAGCCCAAGGCTAATCTCAATGTTGCCAAGCGTGGTATGATAAGGTATGGATCATCATCTCCAAGGAGACATTCTGCTGGAACTTCAAAGCATAGCCCAAGACTTTCAGGAGTAAGGGCCTTACAAGTGGGTGAAAAAGCAGCTTCTGACATGGACAACTGCTCAGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAGTCAATGGATGACTTCAGGAACAAGCCCAGTTCCCCATTGTCGAAAGTAGCCAGAGAAGATACTAGTCAGAATTTCAATGACGACATTGATCTCCTAGGATTTGGAGATGCAGATTCTGAAGAGAGATTAAGTGATATATCTGATGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCTGCAGTATTGTGGAGTATACTCTTTTCCCTGAAGCCGAGAAGCCAGCCGAAATTACACCAACTAAGAACACAACAGCAGAGAACCTGCCAGCCGAGAACACAGAGAAATCCATTATGCCATCCAAAATTCCCAAAGCCCCACATGTTCCGCAAAAGGTGCCATTAAAATCTTCTAGGTTGTCATCTAACAAAAGTTCCTCGAAGCCTCTCCCAAGCGTTAAGAAAACCACTGCTGGTAGCTCAACTTCGGTGAAGGCCACTCCTAAACGATGGCAATAA 1350 0.4356 MLDIQNKYYFLDLHTLGIWNSTQPNGLVVPDASLHSVNSMTDVLELMNVGLMNRATSSTALNERSSRSHSVLTVHVRGTDLETNTLLRGCLHLVDLAGSERVERSEATGDRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDIASYSETISTLKFAVRVSGVELGAARSNREGRDVRELMEQVASLKDALARKDEEIERLQQPKANLNVAKRGMIRYGSSSPRRHSAGTSKHSPRLSGVRALQVGEKAASDMDNCSEYSDKHSEAGSHQSMDDFRNKPSSPLSKVAREDTSQNFNDDIDLLGFGDADSEERLSDISDGGLSMGTETDGSICSIVEYTLFPEAEKPAEITPTKNTTAENLPAENTEKSIMPSKIPKAPHVPQKVPLKSSRLSSNKSSSKPLPSVKKTTAGSSTSVKATPKRWQ 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0085 449 MobiDBLite consensus disorder prediction 371 449 - -
Dere13g0085 449 ProSiteProfiles Kinesin motor domain profile. 1 189 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0085 449 Pfam Kinesin motor domain 23 187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0085 449 PANTHER KINESIN-LIKE PROTEIN KLP-3 17 411 IPR027640 GO:0003777|GO:0007018
Dere13g0085 449 MobiDBLite consensus disorder prediction 299 315 - -
Dere13g0085 449 MobiDBLite consensus disorder prediction 242 315 - -
Dere13g0085 449 FunFam Kinesin-related protein3 26 231 - -
Dere13g0085 449 PRINTS Kinesin heavy chain signature 59 76 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0085 449 PRINTS Kinesin heavy chain signature 139 160 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0085 449 PRINTS Kinesin heavy chain signature 90 108 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0085 449 MobiDBLite consensus disorder prediction 280 298 - -
Dere13g0085 449 Coils Coil 203 223 - -
Dere13g0085 449 SMART kinesin_4 2 197 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0085 449 Gene3D Kinesin motor domain 14 230 IPR036961 -
Dere13g0085 449 MobiDBLite consensus disorder prediction 375 392 - -
Dere13g0085 449 MobiDBLite consensus disorder prediction 412 449 - -
Dere13g0085 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 226 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0085 Dere-ChrDere13 1972513 1975604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0085 26 223 Calmodulin-binding Proteins AT5G65930 43.216 4.30e-38 145