Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0084 ATGCAGTTGGAACGAAACGAACAGGGAAAAAGCGGTGTTGACAGCTTAAATGGTTTTCCCGGTGAAGATGTTAGCCAAATAGAAGCTTTAGGAGGCATGCCTAAAGGTGGCCGGCTGGAATCTCTGTTGAAGTGGATAAATAGTGTGCTTCCTCACTTTAATCTACCCATAGAAACTTCAGGGGAGGAACTGAGGGCATTGTTGAGGGATGGATCTGTATTGTGCAGTATTTTGGACAAGCTGGTTCCTGGTTTAGTGGAAATTGGAAGTGGTTCCTTGAATGAGCCAGTGAATATTAAAAGGTTTCTGCAGGCTATGGATGAACTGGGATTGCCTGGATTTGAATTGTCAAGCCTAGAGCAGGGATCCATTGTACCTGTGTTGCAGTGCCTTGAAACTCTGAAAACTCAATTAGCTTTAAATGTTGAGAGACAAAATATCCAAAGTTTTTCAAGAAAGAGGTGGGATCAGTCAGATCTAGCATACATAGCCTTTGGAAATGAAGACACGCTAAAAATTTCAGGTGATTCAAAATTCCAACAGGTTGAGGGTTCTGTCTTACCAGATGAAGCTAATTCCGTATGTCATGTTGGATCTAAGTCTAACGAACTGTTCCAGTTGAGACGAGGATCACATTTAGATCTTTCTGATCCTAAAATTTTGGAGTTTCTAAAATCAAACAGTTTAGATAATGCCTCCACTCAATCACTTTTTAACTTGGGAAATAGGATTATGTGTGATATCTTTGAAAGAAAGAATGGAGATGTACCTCAACATGCAGCATGCCTGTTGAGAAAAATTCTCCAAGTGATAGAGTGGCGCTTTGCAAATCAAGCAGAAAGCCTAAAACATCAAAACAATCTTTTCAAGGCTCGCGAGGGGAAGTACCAATTGAAAATAAATGCACTTGAAACCCTAGCAGCAGGGACAGCTGAAGAGAATGAGTTTGCTCTGCAGCGTGAGAAAACTAAAATGGAGGAAAAGAACAAACTTGATGAGCAGGATGTTGCTCGATTAAAAAAAGACAAAGTTCGTAGTGACATTGAGATTTCTGCATTGAAGCAAGAATTGGAAATAGCCAAAAGGGCACATGAAGAGCTTTGTTTGCAGTCAGAATTATATGCTAAAGAATCTAAAGCTGAATATGAGAAGAGGATAGGAGAACTAGAATGTTGTCTTGCTGACGCAAGGAATCAAGCAAAGAAACTGGAGGCATTTATAGAATCTAAATCTATTAAATGGAAGAACAAAGAGCATACCTATCAAAGTTTCATAAGTTACCAATTTGGAGCTTTCAAGGAATTGAAAGCTGCAATGGAATCTATAAAAGATGATGTGTTAAAAACGAAAAGAAGCTACTCAGAAGAATTCAAGTATTTGGGGAAGAAGCTCAGAAGTCTAGCTGAAGCTGCTGAAAACTATCATGCCGTTCTTACAGAAAATCGGAAATTATATAATGAAGTTCAAGATTTGAAAGGAAATATCCGTGTATATTGTCGAATAAGACCATTTCTTCCCGGGCAAAGTCAAAACCATACAACCATCGAATTGATCGGTGAAAATGGAGAATTAGTTGTTAGCAATCCTCTCAAACAAGGAAAAGAGAGTCGTAAACTTTTTAAATTCAACAAGGTTTTTGGTCCAGCAGCAAGTCAAGAGGAGGTATTCATGGATACCCAACCACTAATTCGTTCTGTACTTGATGGGTACAATGTTTGCATATTTGCTTATGGTCAAACTGGCTCAGGAAAAACGTATACAATGAGTGGACCTAGCCTTTCATCAAAATCAGATTGGGGAGTCAACTATCGAGCACTTCATGATCTTTTCCATATCTCCCAAAGTAGGAAAGGCTCTATTGTTTATGAAGTTGGTGTTCAAATGGTTGAGATTTATAATGAACAAGTTCGTGATTTACTATCTAGCAACGGTCCTCAAAAGAGATATCCTTATCATTTTTTTAGTTGTTTTGCATTTTAA 1980 0.3843 MQLERNEQGKSGVDSLNGFPGEDVSQIEALGGMPKGGRLESLLKWINSVLPHFNLPIETSGEELRALLRDGSVLCSILDKLVPGLVEIGSGSLNEPVNIKRFLQAMDELGLPGFELSSLEQGSIVPVLQCLETLKTQLALNVERQNIQSFSRKRWDQSDLAYIAFGNEDTLKISGDSKFQQVEGSVLPDEANSVCHVGSKSNELFQLRRGSHLDLSDPKILEFLKSNSLDNASTQSLFNLGNRIMCDIFERKNGDVPQHAACLLRKILQVIEWRFANQAESLKHQNNLFKAREGKYQLKINALETLAAGTAEENEFALQREKTKMEEKNKLDEQDVARLKKDKVRSDIEISALKQELEIAKRAHEELCLQSELYAKESKAEYEKRIGELECCLADARNQAKKLEAFIESKSIKWKNKEHTYQSFISYQFGAFKELKAAMESIKDDVLKTKRSYSEEFKYLGKKLRSLAEAAENYHAVLTENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQNHTTIELIGENGELVVSNPLKQGKESRKLFKFNKVFGPAASQEEVFMDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQSRKGSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRYPYHFFSCFAF 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0084 659 SMART ch_5 38 134 IPR001715 GO:0005515
Dere13g0084 659 ProSiteProfiles Kinesin motor domain profile. 494 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0084 659 MobiDBLite consensus disorder prediction 1 20 - -
Dere13g0084 659 Coils Coil 379 399 - -
Dere13g0084 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 647 IPR027417 -
Dere13g0084 659 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 436 649 - -
Dere13g0084 659 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 648 IPR027640 GO:0003777|GO:0007018
Dere13g0084 659 Pfam Microtubule binding 479 640 IPR031852 GO:0008017
Dere13g0084 659 Gene3D - 37 140 IPR036872 -
Dere13g0084 659 SUPERFAMILY Calponin-homology domain, CH-domain 39 138 IPR036872 -
Dere13g0084 659 Pfam Calponin homology (CH) domain 40 134 IPR001715 GO:0005515
Dere13g0084 659 ProSiteProfiles Calponin homology (CH) domain profile. 36 139 IPR001715 GO:0005515
Dere13g0084 659 SMART kinesin_4 492 649 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere13g0084 659 Coils Coil 322 370 - -
Dere13g0084 659 Gene3D Kinesin motor domain 436 652 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0084 Dere-ChrDere13 1967012 1972381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0084 311 640 Calmodulin-binding Proteins AT5G65930 33.636 8.25e-32 130