Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0074 ATGGGATTCCCAGTGGGGTGCACCGAACTTCTCTTCCCCAAGCTGTTCCTCCAGATCCTTTCTGTACTGGGATTCATCAGAAAACTCATCTCCCTCCTCTTTCGCTATCTGGGGCTCCACGATTTCCTGGAACCGGACATTGGGTGGGCGGATCACTATTCTACCCGGATACCCGAATTCGAGTCGGTGAGTGCTCTGCTGATCCGGGAAATCCTGCCGGTGGTGAAGTTCTCGGAGCTGGTGGAAGCGCCGGAGAGCTGCGCCGTGTGCCTGTACGAATTCCAAGGGGACGACGAGATCCGACGGCTCACCAACTGCAGGCACATATTCCACAGAGGGTGCCTGGACCGTTGGATGGGATATGATCAGAGAACCTGTCCCTTGTGTCGAACACCCTTCATACCCGACGATATGCAAGCGGCCTTCAATGAGAGACTCTGGGCTGCTTCTGGAATCCCTGAATTCTACCCAGAATCTGATTACCCTCATCTTACTGAGAAGCATAAGGAGAAAAAACGGGAAGATGAGAGCACTGTAGTGGCTTAG 546 0.5366 MGFPVGCTELLFPKLFLQILSVLGFIRKLISLLFRYLGLHDFLEPDIGWADHYSTRIPEFESVSALLIREILPVVKFSELVEAPESCAVCLYEFQGDDEIRRLTNCRHIFHRGCLDRWMGYDQRTCPLCRTPFIPDDMQAAFNERLWAASGIPEFYPESDYPHLTEKHKEKKREDESTVVA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0074 181 CDD RING-H2_RHA1-like 87 133 - -
Dere13g0074 181 SMART ring_2 87 129 IPR001841 -
Dere13g0074 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 137 IPR013083 -
Dere13g0074 181 FunFam RING-H2 finger protein ATL73 68 137 - -
Dere13g0074 181 Pfam Ring finger domain 86 130 IPR001841 -
Dere13g0074 181 SUPERFAMILY RING/U-box 67 137 - -
Dere13g0074 181 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 150 - -
Dere13g0074 181 ProSiteProfiles Zinc finger RING-type profile. 87 130 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0074 Dere-ChrDere13 1841630 1842298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0074 1 151 C3H Transcription Factor Family AT1G63840 61.146 6.06e-61 185