Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0069 ATGATCATTCCCGAGAAGAACCGTCGAGAGATCTGCAAATACCTCTTCAAAGAGGGGGTTTGCTATGCAAAGAAGGACTTCAATCTGGCAAAACACCCGGACATTGATGTGCCGAATCTACAGGTGATTAAGCTTATGCAGAGCTTCAAGTCCAAGGAGTATGTCCGCGAGACCTTTGCTTGGATGCACTATTACTGGTACCTCACTAATGATGGCATTGAGTTCCTTAGAACCTACCTCAATCTCCCTTCTGAGATCGTCCCTGCCACTTTGAAGAAACAAGCTAAGCCCGCTGGTAGACCTTTTGGTGGTCCACCTGGCGATCGCCCTAGGGGTCCACCTAGATTCGAAGGAGAACGTCGATTCGGTGACCGTGATGGGTACCGTGGAGGTCCCCGAGGACCTGGTGGTGACTTTGGAGACAAGGGTGGAGCACCTGCTGACTACAGGCCTTCTTTTGGGGGTGGAAGACCTGGTTTTGGTCGTGGTGCCGGTGGTTATGGAGCACCAGCTAGTTCAAATCTTTCCTAG 531 0.5122 MIIPEKNRREICKYLFKEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGGRPGFGRGAGGYGAPASSNLS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0069 176 MobiDBLite consensus disorder prediction 112 128 - -
Dere13g0069 176 MobiDBLite consensus disorder prediction 91 176 - -
Dere13g0069 176 Gene3D - 1 104 IPR036388 -
Dere13g0069 176 Pfam Plectin/S10 domain 3 94 IPR005326 -
Dere13g0069 176 FunFam 40S ribosomal protein S10 1 104 - -
Dere13g0069 176 PANTHER 40S RIBOSOMAL PROTEIN S10 1 171 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0069 Dere-ChrDere13 1796588 1797899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0069 1 173 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.034 4.09e-78 229