Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0055 ATGTCAGCGCTCCAGAGAGACTCGGAAGTGCAGGGTGGAAATTTGGACTGGCGGCAGCGAGTAGCGAAATCCAGGTCGTCTTCCATTCCTTCCACTGCAAGCCTACTTGTCCTTCTGCATTTACACTGCAACCATCTCCTCTGCTTCCGCTCCGATTCCTTCTCTTTACAACTTTCTCGAACAGGTGAATTTGCTGTTAGCTGTGGACTTTGTAGTAGTGAAATGACTTCCAATGCTGCACGTGGAAATGCTTGCCCGCTACCAATGAAATCCACATCAAATGGCGGATTTCAGGGAGATAATCCTCTAGATTTTGCACTTCCTCTGGCTATTTTGCAGATATGTCTTGTCGTTGTAGTCACAAGGGGACTGGCATATCTTTTAAGGCCTTTAAGGCAGCCACGTGTGATTGCAGAGATTGTGGGAGGAATATTACTCGGACCATCTGCATTGGGACGGAATAAAAGCTATCAGCGTGCAGTATTCCCACCCAAAAGTCTTACAGTATTAGATACTCTGGCAAACCTTGGCCTTATATTTTTCCTTTTCCTAGCAGGACTAGAGCTAGATCCTAAATCTCTGAGTAGAACTGGAAAGCAAGCCCTTGGCATTGCTGTTGCTGGAATATCCCTTCCTTTTGCGCTAGGAATTGGCACATCTTATGTTCTCCGAGAAACAATTGCCCAAGGTGCAGATAGTTCGGCATTTCTTGTATTTATGGGTGTGGCCCTCTCCATAACTGCTTTTCCTGTATTAGCCCGTATTCTGGCTGAGTTGAAACTTCTGACTACCAATATTGGCAGAATGGCAATGTCTGTTGCAGCAGTGAATGATGTAGCTGCTTGGATTCTGCTTGCTCTGGCTGTTGCCCTATCTGGCAATAGCCAATCTTCACTTGTGCCAGTGTGGGTCTTCTTATGTGGGTTTGGTTTTGCCATTTGTTCAATCCTCATTATCCCTCCAATTTTCAGATGGATGGCCCAACGCTGCCATGAGGGTGAGCCAGTTGAAGAGATATACATATGTGCCACATTAGTTGCTGTTCTGGCTGCAGGGTTTGTTACAGATGCTATTGGAATCCATGCCATGTTTGGTGCTTTTGTCGTTGGAGTTTTGATTCCTAAAGATGGACCATTTGCTGGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTATCAGGTCTTTTTCTCCCGTTGTACTTTGTGTCAAGTGGATTGAAGACGAATATAGCCACCATTCAGGGGCTGCAGTCATGGGGTCTTCTGCTTTTGGTCACATTTACTGCTTGTTTTGGGAAGATTGTTGGGACTACTGCAATGTCTCTCTTCTGTAAAATACCTTTAAATGAAGCTTTAGTGATGGGATTCCTAATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATTGGTAAAGATAGGAAGGTATTGAATGATCAGACCTTTGCCATTATGGTTCTGATGGCTCTCATTACTACCTTCATCACCACTCCTCTTGTCATTTCTGCGTACAAGCCAGCAAGAAAGGCAAGGATAGCTGATTACAAATACAGAACAATTGAGAGAAAAAATCCAAACAGCGAGCTCCGGGTTCTTTCCTGTTTCCATAGTGCAAAGAATATTCCATCAATTTTAAATCTGATCGAGGCTTCGAGAGGAACCCAGAAGCGTAACACACTTTGTGTGTATGCAATGCACCTTAAGGAACTTTCTGAGAGGTCATCATCTATATTAATGGTACATAAGGCTAGAAAAAATGGGTTACCGTTCTGGAATAAAGGTCACCATGCTGATTCTAATCATGTTATTGTGGCATTTGAGGCATACCGGCAGCTGAGTCAAGTCTCTGTCCGGCCTATGATAGCAATCTCATCTATGGCTGACATGCACGAAGACATATGTGCAACTGCGGAGAGAAAGAGAGCTGCAGTCACTATTCTTCCATTCCATAAACATCAAAGACTGGATGGTTCACTTGAGACCACACGCAATGATTTTAGATGGGTTAACAAAAGGGTACTGGAGCATGCTCCATGCTCAGTTGGAATTTTTGTTGATCGTGGGCTCGGCGGTACGTCCCATGTATCTGCAAGTAATGTTTCTTATTGTGTTACAATACTTTTCTTTGGTGGTGGTGATGACCGTGAAGCCCTTGCTTATGGAGTTCGTATGGCAGAGCACCCTGGCATAAGATTAGTGGTTGTACGCTTTGTTTTGGAACCTAACCCTGTAGGAGAGATTGTGATAGTTGATGTGGACGACTCCGGCGCCAAACTAATGTCAGAAGATGAGGAATTCCTGACTGAATTCAAGCAGAAAAAAGCCGATGATGACTCAATCAACTATACAGAGAAAGTCGTAAAAAGTCGTGCAGAAACAATTGATGCTATCCGTGAGTGTAATTGCTGCAACCTGTTTGTTGTGGGTCGAAGGCCAGATAGCGAAGTAGCCTTTGCTTTGAAAAGAAGTGAATGCCCGGAACTGGGGCCTGTTGGTGGTTTGTTGGCATCCCATGATTTTCCTACGACAGCTTCGGTTTTGGTAATGCAACGGTATCACAACGGGCTGCCAGTTAATTTCACCTCAGAAACGGAAACACAGTCGCTTGATGGAAGCTCAGAATCTACTTGA 2631 0.4432 MSALQRDSEVQGGNLDWRQRVAKSRSSSIPSTASLLVLLHLHCNHLLCFRSDSFSLQLSRTGEFAVSCGLCSSEMTSNAARGNACPLPMKSTSNGGFQGDNPLDFALPLAILQICLVVVVTRGLAYLLRPLRQPRVIAEIVGGILLGPSALGRNKSYQRAVFPPKSLTVLDTLANLGLIFFLFLAGLELDPKSLSRTGKQALGIAVAGISLPFALGIGTSYVLRETIAQGADSSAFLVFMGVALSITAFPVLARILAELKLLTTNIGRMAMSVAAVNDVAAWILLALAVALSGNSQSSLVPVWVFLCGFGFAICSILIIPPIFRWMAQRCHEGEPVEEIYICATLVAVLAAGFVTDAIGIHAMFGAFVVGVLIPKDGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIQGLQSWGLLLLVTFTACFGKIVGTTAMSLFCKIPLNEALVMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALITTFITTPLVISAYKPARKARIADYKYRTIERKNPNSELRVLSCFHSAKNIPSILNLIEASRGTQKRNTLCVYAMHLKELSERSSSILMVHKARKNGLPFWNKGHHADSNHVIVAFEAYRQLSQVSVRPMIAISSMADMHEDICATAERKRAAVTILPFHKHQRLDGSLETTRNDFRWVNKRVLEHAPCSVGIFVDRGLGGTSHVSASNVSYCVTILFFGGGDDREALAYGVRMAEHPGIRLVVVRFVLEPNPVGEIVIVDVDDSGAKLMSEDEEFLTEFKQKKADDDSINYTEKVVKSRAETIDAIRECNCCNLFVVGRRPDSEVAFALKRSECPELGPVGGLLASHDFPTTASVLVMQRYHNGLPVNFTSETETQSLDGSSEST 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0055 876 Gene3D - 563 826 - -
Dere13g0055 876 FunFam Cation/H(+) antiporter 15 109 511 - -
Dere13g0055 876 Gene3D - 109 512 IPR038770 -
Dere13g0055 876 Pfam Sodium/hydrogen exchanger family 116 498 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Dere13g0055 876 PANTHER CATION/H + ANTIPORTER 85 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0055 Dere-ChrDere13 1653932 1657732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0055 75 853 Antiporter Super Family AT5G41610 69.670 0.0 1097