Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0049 ATGAACGACGCAGATGTCTCCAGGCAAATCCAGCAGATGGTGAGGTTTATCCGCCAGGAAGCTGAGGAAAAAGCCAACGAGATCGCTGTCTCTGCCGAAGAAGAATTCAACATCGAGAAGTTGCAGTTGGTTGAAGCCGAGAAGAAGAAGATCAGGCAAGAATACGAGCGCAAAGAGAAGCAAGTAGAAATTCGGAAGAAGATTGAGTACTCTATGCAGCTGAATGCTTCTCGAATAAAAGTTCTTCAAGCCCAAGATGATGTGGTTAATTCAATGAAAGACGTTGCATCTAAGGAACTTTTGAATGTGAACCGTGATCATCATGTGTACAGAAACCTTCTGAAAGATCTCATTGTTCAGAGTCTGCTAAGACTGAAAGAACCTTCTGTGTTATTGCGATGTCGGAAAGATGACCTAGATTTGGTAGAGGATGTGTTGGATTCTGCTGCACAGGAGTATGCTGATAAAACAAATGTTCACCCACCAAAAATCGTTGTTGACAAGCATGTCTATCTTCCACCTGCACCTAGCCATCATGATCCTCATGGTCTCTTCTGCTCTGGGGGTGTGGTGTTGGCTTCTCAAGATGGAAAGATTGTGTGTGAAAATACCCTTGATGCCCGATTGGATGTAGTATTTCGTAAAAAGCTTCCAGAGATCCGCAAGCAGCTCTTTGGACAAGTTGTTGCTTGA 693 0.4387 MNDADVSRQIQQMVRFIRQEAEEKANEIAVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKDVASKELLNVNRDHHVYRNLLKDLIVQSLLRLKEPSVLLRCRKDDLDLVEDVLDSAAQEYADKTNVHPPKIVVDKHVYLPPAPSHHDPHGLFCSGGVVLASQDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVVA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0049 230 Gene3D - 92 228 IPR038495 -
Dere13g0049 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Dere13g0049 230 Gene3D - 1 62 - -
Dere13g0049 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Dere13g0049 230 Coils Coil 29 61 - -
Dere13g0049 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Dere13g0049 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0049 Dere-ChrDere13 1614349 1618938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0049 1 230 Primary Pumps ATPases(2) AT4G11150 78.696 7.20e-133 371