Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0033 ATGGAAATGGGACGCTTAACAATTAGGCCCATTATTGAACCCTTTGCCATGCCCAGCTATATTGTTAAGGGAGGGCAATTTTACAATTTGGGCTCCTCAGCGTGCATACAAACCGCAGAAATGACAGAAGAAGAATTTCAGAACGGAAGGGATGACATGCTTATCGATGAATGTGAACCAGAAGCGACAGAGCAAAAGCAGGGAAATGCTGTTCCTAATGAGTTCAATTTGAATTACCTTAAAATATACTACGGAAAGTTATTTCCTCATGCTGATGTTTTTAGATGGATGTCTTACGGCAATGATGGGAAACATCCGGGTTGTGATCCTTCTTATGTTAGCCGGAGGGAATTTTCATTTACACTTGACAATGATATATATCTACGATTCCAATCTTTCAACAGTGCTGTCGAACTTGAAAACTCCATCAAAGAGAAGTGCCCAATTAAGATTGATATTGGACCTGTGTATAGTGTGGATCCTACGAAAAGGCACGCCTATGCACAGAGTGGTGATAATGTTTTCACTCCTGTTGAGAGGGAGCTTATTTTTGATATAGATATGACAGATTACGATGACATTAGATACTGCTGCTCCGGTGCTGATGTTTGCTTGAATTGCTGGCCATTGATGACTATAGCTATTAAAGTGATTGATACTGCCTTAAGAGATGATTTTGGCTTTAAACACATTCTATGGGTTTATAGTGGCCGACGTGGTGTTCATTGTTGGGTCTGCGATGGGAAGGCAAGAAGGTTGACTAATGAGCAGAGAACAGCTATTGCTGACTATTTTCGTGTCTACAAGGGAAATGAAAATAGTCATAAGAAGGTTTCTTTGACGGGTCTTGCTCTTCATCCTTTCCTGGTGAGAGCGTACACTGAAGTTCTTAAGGATTTTTTTGAGAAAAGACTGCTAATAAGTCAAAATTTACTTTCTACTGAAGAGAGATATGAGAAGATCCTAGAGATGATTCCTGATGCAGCTATTACTTCTGAACTTAGGGGCAGGTGGCAAGAGAATAGGCGGTCCTCTCATGCAAAAGAAGACATTAATGTTGTTCGATGGGAACAGCTCAAACAGTTGCTGCAATCAGGACGGAATAAGGCACAAGGTCTGCGAAGGTGTGTTGAAGAGATTGTGTTCTCCTTTACTTACCCCAGGCTAGATATGGAGGTTTCGAAGCATATGAATCATTTGCTGAAAGCGCCATTCTGCGTGCACCCAAAAACAGGCCGCATTTGTGTCCCTATTGATCCAAATCAATGTGAGCAGTTTGATCCTACCACAGTACCAACCCTTTCACAGCTTTTAGAAGAGCTTAATGAAAGAGGTTCGAGAGATGATGTAGATGGTGAATGGAAGGGAACTTCATTTGGAAGTGCTGTCAGCCTTTTCAGATCGTCATTCTTACAGCCTCTGCTAAAAGCTTGCAAGGAGGACATAGAAAATTCCTACAATGCAAAATTGCAGCAGTCGAAAAATTCCCTTAGTTGCTTTCATATATCTATGTCAATGCCCAGGAATGCTTTGGAGTTGGGCTCTGATGTCCATGTCCATGTCTATGTAATGAAGCAGTAA 1581 0.4137 MEMGRLTIRPIIEPFAMPSYIVKGGQFYNLGSSACIQTAEMTEEEFQNGRDDMLIDECEPEATEQKQGNAVPNEFNLNYLKIYYGKLFPHADVFRWMSYGNDGKHPGCDPSYVSRREFSFTLDNDIYLRFQSFNSAVELENSIKEKCPIKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELIFDIDMTDYDDIRYCCSGADVCLNCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRTAIADYFRVYKGNENSHKKVSLTGLALHPFLVRAYTEVLKDFFEKRLLISQNLLSTEERYEKILEMIPDAAITSELRGRWQENRRSSHAKEDINVVRWEQLKQLLQSGRNKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRICVPIDPNQCEQFDPTTVPTLSQLLEELNERGSRDDVDGEWKGTSFGSAVSLFRSSFLQPLLKACKEDIENSYNAKLQQSKNSLSCFHISMSMPRNALELGSDVHVHVYVMKQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0033 526 CDD AE_Prim_S 104 428 IPR014052 GO:0003896|GO:0006269
Dere13g0033 526 PANTHER DNA PRIMASE SMALL SUBUNIT 66 483 - -
Dere13g0033 526 Pfam DNA primase small subunit 184 419 IPR002755 GO:0003896|GO:0006269
Dere13g0033 526 Gene3D DNA primase, PRIM domain 67 480 - -
Dere13g0033 526 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 81 439 IPR014052 GO:0003896|GO:0006269
Dere13g0033 526 SUPERFAMILY Prim-pol domain 75 443 - -
Dere13g0033 526 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Dere13g0033 526 FunFam DNA primase 67 480 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0033 41 498 Core DNA Replication Machinery Family AT5G41880 64.270 0.0 642