Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0030 ATGCGTTCCATGGAGAAAACACCCAATCCTCAAGATATCGGCGGCCTGTACGATAACTGTCGTCGAAAGAGACAGCGAATCATAACGGTACCGTCTTGGAAGATATCCCCCATGGAATCTGGAGAAGAAATATGCACAAATACAGGGGCCTCCGCCTCCGCTTCCGTCTCACACGGTTCTATATCGGTGATAGGGAGGCGGAGGGTGATGGAGGATGCGGTGAAGATAATACCGAGATTCATGGGTGGGTACGACTTCTTTGCGGTTTATGACGGTCATGGTGGGGCCACGGTGGCGAATGCTTGCCGAGACAGGCTGCACTTGCTGGTGGCGGAGGAAGTAGAGGAGGTGGGAGGAGAGGGAGGATTGGATTGGCATAAGGTGATGTGTACTTGCTTCGTGAGGATGGACCACGAAGTTGAAGGCGGTGATGAAGAAAATATGGTGGGTTCCACGGCGGTGGTCGTCATAGTGGGCAGGGAGGAGCTTGTGGTCGCCAACTGTGGTGACTCCAGAGCCGTCTTATGCCGTGGGGGTGTTGCCGTCCCACTCTCAAGAGATCATAAGCCAGATCATCCAGATGAAAGGGAGAGGGTGGAAACAGCCGGAGGAAGGGTCATCAGTTGGAACGGCGATCGCGTCCTAGGAGTGCTCGCCACTTCCAGATCTATAGGGGACCACTGCATGAAGCCGTTTGTGATATCAGAACCGGACGTAAACGTGTACGAGCGAACAGAGGGAGATGAGTTTATAGTGGTAGCAAGTGACGGGCTATGGGACGTGATATCCAACAATTTGGCTTGCGAGGTAGTGAGGAGATGCCTTGATGGTCGGATGAGGAGGACTTTTAAGGAGGGCTTCATTAGGAGTTGCGCAGCGGAGGCCGCAGCGTTACTAGCGGAGTTGGCTATGGCTCGTGGAAGCAAAGACAATATCAGTGTTATAGTTGTTCAGCTTAAGCCTTCTTCTACTTGA 975 0.5292 MRSMEKTPNPQDIGGLYDNCRRKRQRIITVPSWKISPMESGEEICTNTGASASASVSHGSISVIGRRRVMEDAVKIIPRFMGGYDFFAVYDGHGGATVANACRDRLHLLVAEEVEEVGGEGGLDWHKVMCTCFVRMDHEVEGGDEENMVGSTAVVVIVGREELVVANCGDSRAVLCRGGVAVPLSRDHKPDHPDERERVETAGGRVISWNGDRVLGVLATSRSIGDHCMKPFVISEPDVNVYERTEGDEFIVVASDGLWDVISNNLACEVVRRCLDGRMRRTFKEGFIRSCAAEAAALLAELAMARGSKDNISVIVVQLKPSST 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0030 324 FunFam Protein phosphatase 2C 51 50 324 - -
Dere13g0030 324 Pfam Protein phosphatase 2C 60 312 IPR001932 -
Dere13g0030 324 ProSiteProfiles PPM-type phosphatase domain profile. 57 319 IPR001932 -
Dere13g0030 324 Gene3D - 51 323 IPR036457 -
Dere13g0030 324 SUPERFAMILY PP2C-like 51 320 IPR036457 -
Dere13g0030 324 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Dere13g0030 324 PANTHER PROTEIN PHOSPHATASE 46 319 IPR015655 GO:0004722|GO:0006470
Dere13g0030 324 SMART PP2C_4 47 317 IPR001932 -
Dere13g0030 324 CDD PP2Cc 56 319 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0030 Dere-ChrDere13 1473519 1474755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0030 58 320 PP2C-type Phosphatase Gene Family AT1G07430 46.057 3.83e-82 254