Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0002 ATGTCGCTACGTGCCTCTGAACCCGCAAATTCTGAACATGAAAGTGCTTCAAACGAAGAGGAAGCTTCGGAGGAAGAAGCTTCATACGAAGAAGAGGAGGTGCGAAGGGATTCAGCAAAACCACCGTTTCCTTTGCCTTCTGAGAAACAGAGAGACGTCATTCCAATGGCTTTGACACCGGCTTTTCCTCTGGATGAAAATGATGAATCTGAAGCGGAAGGCTCAACACAAGGAGTGGAACAGAAAATGCTGCCATCGCCTGCACAGAAGAAGCGGAAGTCCCGACCTTCAGTTATGCCAGTCGGAGCAGCAAGAAAGAAGCGCACAAATGCCAGGCGTGAAAAGATCCCAATATCAGACAATGAGAGTAATGCGAAGATGCGTTTTGAGAGGCTGTGGAGTGAGGAAGACGAAATTACAGTACTCACGGGCTTACTTGAGTACACGCCAAGGAATAAAGCAGATATGAAAGTCTTTTATAATGTCATTAAAGACTCGCTCCGTATTCAGGTTTCCCAATCGCAATTAGTGAAGAAGATTTGGAAATTAAAAAAGAAGTACACAAACAAAGCAAGGAGAGGTAAAAATGGTGCCGACCCAAAGTTTACAAATCCGCATGAAAAGAAAATATTTGAATTGTCTAAGAAGATGTGGGCCAAAAATGAAGAATCATCACGTGAAGTAATTGGGTATGAGAAAAGTTTGGGTTCGTGTGTTAGGGGATTTGAATTGATTGAAGGATCCAAGAAAGCAGAGTTGGAGGACCAGCGGAAGACATTGGAAACGGCTGAATTGGAGCTTTATGTGGAGCGAGCAAAGCTTGAAGCCAAACTTGCAGAATTAGATAGTAAGCAAGCAGAATTAAGTAGGAAGCGAACTCAACTAGCGGTAGAAGAGCGAATATTGCTGCATCTAATGGATCCCGCCAACAAGATGTTGAACATGATATTTGTGGAAACGATGATACATTTTACCTGCACCAACGTGACCATATGCATTGACAAAAGTGACTTTCAATGCCTGTGGCCTCCAGAATGTGCTTGCCTTTCTGGGCAATCCCCTGATCAAAGGTGGCTTTGCATGCGCATGGGACCTGGTACACCATCTTAA 1110 0.4405 MSLRASEPANSEHESASNEEEASEEEASYEEEEVRRDSAKPPFPLPSEKQRDVIPMALTPAFPLDENDESEAEGSTQGVEQKMLPSPAQKKRKSRPSVMPVGAARKKRTNARREKIPISDNESNAKMRFERLWSEEDEITVLTGLLEYTPRNKADMKVFYNVIKDSLRIQVSQSQLVKKIWKLKKKYTNKARRGKNGADPKFTNPHEKKIFELSKKMWAKNEESSREVIGYEKSLGSCVRGFELIEGSKKAELEDQRKTLETAELELYVERAKLEAKLAELDSKQAELSRKRTQLAVEERILLHLMDPANKMLNMIFVETMIHFTCTNVTICIDKSDFQCLWPPECACLSGQSPDQRWLCMRMGPGTPS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0002 369 PANTHER BNAANNG10740D PROTEIN-RELATED 7 274 IPR007592 GO:0006355
Dere13g0002 369 Pfam Protein of unknown function, DUF573 129 218 IPR007592 GO:0006355
Dere13g0002 369 MobiDBLite consensus disorder prediction 1 111 - -
Dere13g0002 369 Coils Coil 269 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0002 Dere-ChrDere13 1031863 1033739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g0002 91 219 GeBP Transcription Factor Family AT1G11510 38.519 9.77e-22 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Dere13g0002 DUF573 1.2e-27 CL0123