Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1860 ATGATGGATGATGACTTGGAAAGTGGTAGCTTGGGGCCTTACCAAGACAAACCAAGAACATTTCCCAATATGCGCAGTAAAGCTTACACCCCGCTAATATTTCGTATTCTACTGAGTATAAATGTTCGTGTATTGTTCATAATTTTGCTCCTGGGTCTCGGAGCTATCTTCTACATTGGAGCAAGCACATCTCCGATTATTGTGTTTGTCTTCTCTGTTTGTATTCTCAGTTTCCTTGTGTCAATATATCTTACAAAGTGGGTGCTTGCAAAGGATGAGGGACCTCCTGAAATGGTTCAGATATCAGATGCTATACGAGATGGAGCTGAAGGATTTTTCAGGACCCAGTATGGCAGTATATCCAAGATGGCACTGTTGCTTGCTCTGGTTATCCTTTGCATATATTTGTTTCGTAGTACAACTCCTCAACAGGAAGCTTCAGGCCTGGGAAGGTCAACCTCTGCATACATCACAGTAGCTGCATTCCTGTTAGGTGCTCTTTGTTCTGGCATTGCAGGATATGTAGGAATGTGGGTGTCAGTCCGTGCCAATGTTAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTAGCTACTCGCGCTGGTGGTTTCTCAGCTATCATTGTTGTTGGTATGGCCGTAATTGGTATTGCGGTCCTTTACGCCACATTTTATGTTTGGTTGGGTGTAGACACGCCAGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTCTTGTCGGATATGGCTTTGGTGCCTCCTTTGTTGCACTGTTCGCTCAGTTGGGTGGTGGAATATACACAAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTTGAGCAGGGGATTCCTGAAGATGACCCGAGGAATCCTGCTGTTATTGCTGACCTGGTTGGGGACAATGTGGGGGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCCATGATACTTGGGGGGACAATGGCACAGCGGTGTAAAATAGAAGACCCATCTGGCTTCATCTTGTTTCCTCTTGTCATTCACTCGTTTGATCTAGTCGTTTCATCAGTTGGAATATTTTCAATTAGGGGAACACGTGAGTCTGGTGTGATGGCTCCCATTGAGGATCCAATGGCAATTCTTCAGAAAGGATACTCTGTTACTATAGTTTTAGCTGTTCTGACATTTGGTCTGTCTACCCGGTGGTTACTTTATACTGAGCAAGCTCCTTCGGCGTGGTTCAATTTTGCCTTGTGTGGGTTGATTGGTATAATCACAGCTTATATTTTTGTCTGGATAACCAAATTTTACACGGATTACAAGCATGAGCCTGTGCGCACATTGGCCCTTTCTAGCTCTACGGGTCATGGGACTAATATAATTGCTGGTGTCAGCTTGGGCCTGGAATCAACGGCTCTTCCTGTTCTTGTCATCAGCGTGTCAATTGTCTCGGCTTTCTGGCTGGGTCACACCTCTGGACTAGTTGATGAAGCAGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTAGCAACAATGGGAATGTTGAGCACTGCCGCCTATGTTCTAACCATGGATATGTTTGGTCCAATTGCTGATAATGCTGGAGGAATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATGTTCTTGATGCAGTTGGAAACACAACCAAAGCTACCACTAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTTCTGCATTTGCGCATGAACCTTTTAAACAGGTTGATATTGCTATTCCAGAAGTTTTTATTGGTGGATTGTTGGGTTCCATGCTTATTTTTCTGTTCAGTGCTTGGGCTTGTTCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGACAGGCCTGGTATTATGGAGTATAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCATCACTAAGGGAGATGATAAAGCCTGGTGTCCTTGCCATCATTTCACCTATTGTAGTTGGATTTCTGTTCCGAATTTTGGGTTACTATACAGGGCATCCCCTACTTGGGGCTAAAGTTGTGGCTGCATTGCTGATGTTTGCAACAGTTACTGGTATTCTGATGGCACTTTTTCTGAACACAGCTGGTGGTGCTTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGATGCGCACAAAGCTGCAGTGACGGGTGATACAGTGGGAGATCCATTCAAAGACACCGCTGGGCCTTCACTTCATGTTCTTATCAAGATGCTTGCAACAATTACTCTTGTTATGGCTCCAGTTTTCCTTTGA 2406 0.4485 MMDDDLESGSLGPYQDKPRTFPNMRSKAYTPLIFRILLSINVRVLFIILLLGLGAIFYIGASTSPIIVFVFSVCILSFLVSIYLTKWVLAKDEGPPEMVQISDAIRDGAEGFFRTQYGSISKMALLLALVILCIYLFRSTTPQQEASGLGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGFSAIIVVGMAVIGIAVLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVIHSFDLVVSSVGIFSIRGTRESGVMAPIEDPMAILQKGYSVTIVLAVLTFGLSTRWLLYTEQAPSAWFNFALCGLIGIITAYIFVWITKFYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLVDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFKQVDIAIPEVFIGGLLGSMLIFLFSAWACSAVGRTAQEVVNEVRRQFIDRPGIMEYKEKPDYGRCVAIVASASLREMIKPGVLAIISPIVVGFLFRILGYYTGHPLLGAKVVAALLMFATVTGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPVFL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1860 801 Pfam Inorganic H+ pyrophosphatase 75 796 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Dere12g1860 801 PIRSF H+-PPtase 60 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Dere12g1860 801 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 64 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Dere12g1860 801 NCBIfam V-type H(+)-translocating pyrophosphatase 67 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Dere12g1860 801 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 91 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1860 Dere-ChrDere12 31529716 31540814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1860 1 801 Primary Pumps ATPases AT1G16780 87.765 0.0 1456