Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1858 ATGTGGTTTCCAAATCCAAAGGCAACGGGAATTAGAAAGGGAGGAGGAGGTAATGGGCTGGTGGCGGTTGCAATAGACAAGGACAAAGGGAGCCAACACGCTCTGAAATGGGCCGCTGATAGTCTTCTTACCAGGGGCCAAACTGTCATTCTAATCCACGTTTTGCACAAGACATCGCCTCCTGCTTCAATAGGAGGAAGCCAGGCCGTAATATGTAACATCAGCAATCCATCTGCATCGCCCCAAAAGCACCAACTTGACAAGACTACCAAGGATCTATTTCTTACATTCCATTGCTTTTGTACACGCAAAGATATACAATGCCTCGATGTCCTACTTGAAGACACCGATGTTGTGAAGGCAATAACAGAATTTGTCTCTCACGCTGCGATAGAGAACTTGGTGCTTGGGGCAACATCAAGGCATGGTTTTATTAGATTTAAGTCATCAACTACACCAAGTGGCATATCCAAAGGGGCACCGGATTTCTGTACCGTGTATGTCATTTCTAAGGGGAAAATATCTTCTGTTCGGAATGCTTCCCGTCCAGCTCCTCATACTTCTCCTCTGCTTAGTAACATGCAGAATCTAAATAAACAGATTGACAATCAACCTGAGATACCCTCAAGACGTTTGCATTTGAGAGACAAGACACCTACCAAACCTCACAGTTGGCAAGATGAATCCATTAAGTCAGCATATGGAAGAGGAAGAGGAGGCTTGAGCGGAAGGTCATGTGTGGACTTTGCAGATTCAGATACAGACATATCATTTGTAAGCTCTGACAGGCCAAGTAGTGAACGCCCATCCTCTGTGTTCTACGATTATATGGACTCCGCCCCAAATTCACGCATTTCCATCAGTTCAGATCGTAGCTTTAGATCAACTCGTTTGGGCCTCAAGCTCATGGACCCCACTTCACCAGATGTATCATATTCGCAGGATAGCAGTAGAACATCATTTTCATATTCATCTCAGAACATGGATGAAGCAGAAACTGATATGAGAAGGTTGAAGCTTGAGTTAAAGCAAACGATGGATATGTACAGTACAGCATGCAGAGAAGCACTTACAGCGCAACAAAAGTTAATGGAGCTGAACCACTGGAGACGCGAGGAAGAGAAAAAATTAGAAGAGGCGCGATTGGCCCAAGAGGCTGCAATGGCAATTGCAGAGAAAGAAAAAGCAAGGAGTAAGGCGGCCCTGGAAACGGCCGAAGCAGCTAAGAAAATTGCAGTAGTGGAATCACATAAAAGAGCAAGTGTTGAAATGAAAGCTCTGAAAGAGGCAGAGGAAATTAGAAAGCTATTAGATAACATAGCCCAAACTGATGTAAGATATAGGAGATACAGTATTGATGAGATTGAATTAGCAACAGAATTCTTTTCTGAGTCTCGGAAAATTGGAGAAGGAGGATATGGCCCCGTGTATAAATGTTACCTTGATCACACACCAGCAGCAGTGAAGGTTCTGCGCCCAGATGCTGCTCAAGGGAGGTCACAGTTCCAGCAAGAGGTTGACATACTTAGCTGCATACGCCATCCCAACATGGTACTTCTTCTAGGAGCCTGTCCAGAGTATGGCATACTGATCTATGAATATATGGCTAATGGAAGCCTGGAAGATTGTCTGTTTCGTAAGAGGAAGCAGGGTCGTGTTTTGTCATGGCAGATCAGGTTCCGAATCGCTGCAGAAATAGCGACAGGCCTACTGTTTCTGCATCAAACCAAGCCTGAACCCTTAGTGCACCGGGATCTTAAACCTGGCAACATATTGCTAGACCATAACTACGTAAGTAAAATAAGCGATGTTGGATTGGCGAGGCTGCTGCCTGCCGTTGCTGAGAACGTTACGCAATGCCGGATGACATCAGCAGCAGGGACTTTCTGTTACATTGATCCAGAGTATCAGCAAACAGGAATGCTTGGGGTGAAGTCTGATGTCTATTCTCTGGGGATTATGCTTCTACAGTTGGTAACAGGCAAGCCTCCCATGGGATTGGCACACCTTGTAGAAGAGTCAATTGAGAATGGCACATTTGAGGATGTGCTGGACCCATCTGTGCCTGATTGGCCAATTGAACGAGCTTTAAGCTTTGCAAAGCTAGCACTTAAATGTGCAGAACTCAGACGAAAAGATCGGCCAGACCTTGGTAAAGTAATATTGCCAGAGCTCAATAAATTGAAAGAGTTTGCTGAAGAAAATATGAGTAGTATCTTGTTAGGTGGCACTGGTAGTGCTGCGCCTTCCCCCAACCACAGTGAAGCTTCCATGCAACAGGATGTGATGAGCGACCCAAGATTTGGTCATTCTGGAAGCTCAAGAAGCCCATCAAGCCCATCAACGCCGACAGAAGGATAA 2361 0.4532 MWFPNPKATGIRKGGGGNGLVAVAIDKDKGSQHALKWAADSLLTRGQTVILIHVLHKTSPPASIGGSQAVICNISNPSASPQKHQLDKTTKDLFLTFHCFCTRKDIQCLDVLLEDTDVVKAITEFVSHAAIENLVLGATSRHGFIRFKSSTTPSGISKGAPDFCTVYVISKGKISSVRNASRPAPHTSPLLSNMQNLNKQIDNQPEIPSRRLHLRDKTPTKPHSWQDESIKSAYGRGRGGLSGRSCVDFADSDTDISFVSSDRPSSERPSSVFYDYMDSAPNSRISISSDRSFRSTRLGLKLMDPTSPDVSYSQDSSRTSFSYSSQNMDEAETDMRRLKLELKQTMDMYSTACREALTAQQKLMELNHWRREEEKKLEEARLAQEAAMAIAEKEKARSKAALETAEAAKKIAVVESHKRASVEMKALKEAEEIRKLLDNIAQTDVRYRRYSIDEIELATEFFSESRKIGEGGYGPVYKCYLDHTPAAVKVLRPDAAQGRSQFQQEVDILSCIRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFRKRKQGRVLSWQIRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKISDVGLARLLPAVAENVTQCRMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLVTGKPPMGLAHLVEESIENGTFEDVLDPSVPDWPIERALSFAKLALKCAELRRKDRPDLGKVILPELNKLKEFAEENMSSILLGGTGSAAPSPNHSEASMQQDVMSDPRFGHSGSSRSPSSPSTPTEG 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1858 786 FunFam U-box domain-containing protein 51 535 735 - -
Dere12g1858 786 Pfam Universal stress protein family 21 149 IPR006016 -
Dere12g1858 786 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 169 - -
Dere12g1858 786 Gene3D Transferase(Phosphotransferase) domain 1 535 740 - -
Dere12g1858 786 MobiDBLite consensus disorder prediction 305 330 - -
Dere12g1858 786 Gene3D HUPs 20 169 IPR014729 -
Dere12g1858 786 SMART serkin_6 462 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1858 786 ProSiteProfiles Protein kinase domain profile. 462 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1858 786 Gene3D Phosphorylase Kinase; domain 1 440 534 - -
Dere12g1858 786 MobiDBLite consensus disorder prediction 204 241 - -
Dere12g1858 786 PANTHER OS02G0152300 PROTEIN 21 770 - -
Dere12g1858 786 Coils Coil 328 348 - -
Dere12g1858 786 MobiDBLite consensus disorder prediction 206 224 - -
Dere12g1858 786 Pfam Protein kinase domain 463 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1858 786 SUPERFAMILY Protein kinase-like (PK-like) 445 720 IPR011009 -
Dere12g1858 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Dere12g1858 786 Coils Coil 374 408 - -
Dere12g1858 786 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 434 534 - -
Dere12g1858 786 CDD STK_N 20 172 - -
Dere12g1858 786 MobiDBLite consensus disorder prediction 307 329 - -
Dere12g1858 786 MobiDBLite consensus disorder prediction 740 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1858 Dere-ChrDere12 31506474 31510432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1858 1 758 Receptor kinase-like Gene Family AT1G78940 59.359 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dere12g1858 Pkinase 2.4e-41 CL0016