Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1845 ATGGTGGGGCATTATAATTTGTTTTTGGAGTACGTTGTTGGAGGTAGCCTTGCTGATCATATAAAGAATCATATTGGTTGGTTGCCGGAGTCCGATGTTTGGTGGTACGCAACGTTAATGGTGAAAGGAAATAGACATATTCACATGAAAGGCTCTGTTCACTACGACATCAAGCTTCGACAAATCTCACGATTGAGGATGGTACGCCCTTCTTTTGGTCTTGCTCCAATAAATTCCATGTTGCTTCCCTTGATGGTTTGTGTTTATCTTGTTCGTCCTATGGTGATGCAGGGGAGCTCGAACACCTTGGGAGGAAAAATCCCTAATTCAATCGTTTATTGTCCTGATCTGTAG 354 0.4266 MVGHYNLFLEYVVGGSLADHIKNHIGWLPESDVWWYATLMVKGNRHIHMKGSVHYDIKLRQISRLRMVRPSFGLAPINSMLLPLMVCVYLVRPMVMQGSSNTLGGKIPNSIVYCPDL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1845 117 Gene3D Transferase(Phosphotransferase) domain 1 2 64 - -
Dere12g1845 117 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 62 - -
Dere12g1845 117 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1845 117 SUPERFAMILY Protein kinase-like (PK-like) 3 62 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1845 Dere-ChrDere12 31116227 31116580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1845 5 62 MAP Kinase Kinase Kinase AT4G36950 53.448 1.94e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere12g1845 None None None