Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1811 ATGAGATCGAGTCAGCCGCCGCCGGGCACCGGAACGAGCAATCGGGAGCGTCCGCGTCGCCTTAGAGAGTTGAGCTTACCTTTACCGAAACGCGACACATCGTTAGCGATGCCTCTTCCTCTGCCCCCATCTAATTCGGCACCGTCAACGAGTCACCAAGCGGGCGCTTCTCAATCTCAATCGCAATCTCACCAGCAGGTCCCATTTACCGAGCTCGAACGCCTTAATCGTATTGGTAGCGGCAGCGGAGGCACCGTCTACAAGGTCCATCACCGACCCACCGGTCGTTTTTACGCGCTCAAGGTCATATACGGTCACCACGAGGAATCTGTGCGCCGTCAGATCCATCGTGAAATCCAGATTCTCCGGGACGTGGATGACCAGAACGTGGTCAAGTGCCATGACATGTACGATCATAGCGGGGAAATCCAAGTGCTTCTTGAGTTCATGGACGGTGGGTCCTTAGAAGGAAAGCACATCCCCGATGAACAACGCCTAGCAGATGTTGCCCGTCAGATCCTCCGTGGTCTGGCCTACCTTCACCGCCGCCATATCGTTCATCGAGATATCAAGCCCTCGAACCTTCTGATCAATTCGCGGAAGCAGGTCAAGATTGCTGACTTCGGGGTGGGTCGAATTCTGGCACAAACTATGGATCCGTGTAATTCGTCGGTCGGTACCATCGCTTATATGAGCCCCGAGAGAATCAATACCGACATCAATGATGGGCAATATGATGCGTATGCCGGAGATATATGGAGCCTTGGGGTCAGTATATTAGAATTCTACATGGGGAGATTCCCTTTTGCAGTGGGAAGGCAAGGAGATTGGGCTAGCTTGATGTGTGCAATTTGTATGTCTCAGCCACCGGAGGCACCACCCACGGCGTCGATGGAATTCAGGGATTTTATATCGCGCTGTTTACAGAGAGAACCCTCACGGAGGTGGACGGCCTCGCGCTTGTTGGGCCACCCTTTTATAGCTCAAGGAATAGGGCACCAGAACCAGGTTCATCAGAATCTTCATCAACTGCTACCTCCACCTCGACCACTTTCTTCATAG 1062 0.5311 MRSSQPPPGTGTSNRERPRRLRELSLPLPKRDTSLAMPLPLPPSNSAPSTSHQAGASQSQSQSHQQVPFTELERLNRIGSGSGGTVYKVHHRPTGRFYALKVIYGHHEESVRRQIHREIQILRDVDDQNVVKCHDMYDHSGEIQVLLEFMDGGSLEGKHIPDEQRLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPTASMEFRDFISRCLQREPSRRWTASRLLGHPFIAQGIGHQNQVHQNLHQLLPPPRPLSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1811 353 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Dere12g1811 353 FunFam Mitogen-activated protein kinase 2 152 339 - -
Dere12g1811 353 MobiDBLite consensus disorder prediction 1 68 - -
Dere12g1811 353 FunFam Mitogen-activated protein kinase 2 53 151 - -
Dere12g1811 353 CDD PKc_MAPKK_plant_like 71 327 - -
Dere12g1811 353 MobiDBLite consensus disorder prediction 46 68 - -
Dere12g1811 353 ProSiteProfiles Protein kinase domain profile. 72 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1811 353 Pfam Protein kinase domain 73 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1811 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Dere12g1811 353 Gene3D Transferase(Phosphotransferase) domain 1 153 343 - -
Dere12g1811 353 SMART serkin_6 72 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1811 353 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 37 329 - -
Dere12g1811 353 Gene3D Phosphorylase Kinase; domain 1 44 151 - -
Dere12g1811 353 SUPERFAMILY Protein kinase-like (PK-like) 71 346 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1811 Dere-ChrDere12 30795058 30796119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1811 1 343 MAP Kinase Kinase Gene Family AT1G51660 69.714 3.54e-171 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Dere12g1811 Pkinase 3e-63 CL0016