Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1810 ATGCAGATGGGTTCCGTAGAGGAGAAGATAGACCTTGATTTTGATGAGGAGATCCCTTTTAGCTCCTCACCATCTGCAAGGAAAGTCCATACTTTTGATTGTGAGACAACTCGTGTGCTTTCTCCAGTAAATTTGGCCAGCTCATCCGTCTTTGAGAAAATGAGAATAAGACCTATCAGGAGCATATACATTGTCTTAATTAAAGCAAAGATCAACATGTTGCTACCTTTTGGTCCCTTGGCCATATTGCTACATTATATAACAGGAAAGCATGGATGGGTGTTCTTCTTCAGCTTAGTGGGTATTACTCCTTTGGCAGAACGTCTTGGTTATGCTACTGAGCAGCTCGCATTGTATACAGGACCAACAGTTGGAGGTTTGCTCAATGCCACATTTGGCAATGCAACCGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGGGTTGTTCAGCACTCTTTACTGGGCTCAATCTTGTCAAATATGCTTCTTGTTCTGGGATGTGCATTCTTTACTGGTGGGATTGTCCACTACCAAAAGGTTCAGGTTTTCAATAAGGCATCTGCTGTCGTGAATTCTGGGTTGCTGTTGATGGCTGTAATGGGAATACTGTTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCACTTCGGGAAGTCAGAGCTTTCTCTTTCCAGATTTAGCAGCTGTATAATGCTAGTAGCATATGCCAGCTACCTTTTCTTTCAACTAAGGAGTCAGCACAATCTTTATAGTCCAGTTGAAGAGGAAGGAGATAATAGTGAAAATTCTGATGAGGAAGAAGAACGTGAATTAACACAATGGGAAGCAATAGGCTGGCTTTTTATTTTGACAGCATGGGTATCTATATTATCTGGATACCTTATAGATGCCATAAAGGGGGCATCTAAGTCATGGAATTTGTCAGTGGCATTTATTAGTGTCATATTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCAAGCGCTATCATGTTTGCCATGAAGGACAAGCTTGATATTACACTTGGAGTTGCTATTGGATCGTCTACCCAGATATCTATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGGTGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAAATCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTAGCATTTATGTTGCAGGACGGGACCTCAAATTATTTTAAAGGATTGATGCTTATTCTATGCTATCTTATCGTTGCGGCCAGTTTCTTTGTACATGTAGACCCAACAAACGGTGATGGCTGA 1305 0.4107 MQMGSVEEKIDLDFDEEIPFSSSPSARKVHTFDCETTRVLSPVNLASSSVFEKMRIRPIRSIYIVLIKAKINMLLPFGPLAILLHYITGKHGWVFFFSLVGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQHSLLGSILSNMLLVLGCAFFTGGIVHYQKVQVFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELSLSRFSSCIMLVAYASYLFFQLRSQHNLYSPVEEEGDNSENSDEEEERELTQWEAIGWLFILTAWVSILSGYLIDAIKGASKSWNLSVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQIFETATLFITVLVVAFMLQDGTSNYFKGLMLILCYLIVAASFFVHVDPTNGDG 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1810 434 FunFam Vacuolar cation/proton exchanger 122 261 - -
Dere12g1810 434 NCBIfam calcium/proton exchanger 65 424 - -
Dere12g1810 434 Pfam Sodium/calcium exchanger protein 282 421 IPR004837 GO:0016020|GO:0055085
Dere12g1810 434 Pfam Sodium/calcium exchanger protein 93 248 IPR004837 GO:0016020|GO:0055085
Dere12g1810 434 Gene3D - 122 261 IPR044880 -
Dere12g1810 434 Gene3D - 269 425 IPR044880 -
Dere12g1810 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 41 429 IPR004713 GO:0006812|GO:0008324|GO:0016020
Dere12g1810 434 FunFam Vacuolar cation/proton exchanger 269 425 - -
Dere12g1810 434 NCBIfam calcium/proton exchanger 74 424 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1810 Dere-ChrDere12 30783723 30789592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1810 59 434 Antiporters AT3G13320 77.454 0.0 598