Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1807 ATGAAGGACATGGAGAAAAAGAAGTTCCCCATTGGTCCTGAGCATTATGAACTGTACGAGGAGGTTGGCCAGGGTGTAAGTGCTTATGTGCATCGTGCTCTTTGCATTCCCCTCAATGAGATCGTTGCTATCAAAATCCTGGATTTTGAACGCGACAACTGCGATCTGAATAACATTTCTCGTGAAGCACAGACCATGATCTTGGTTGACCACCCTAACGTCCTCAAATCACACTGCTCCTTTGTTAGCGATCATAATCTATGGGTTGTCATGCCATTCATGGCTGGTGGTTCCTGTCTTCACATTTTGAAAGCTGCCTACCCGGATGGTTTTGAGGAGGTTGTAATAGCTACAATATTGCGGGAGGTATTAAAGGGTTTAGAGTACCTTCATCATCATGGGCATATACATAGAGATGTCAAAGCTGGGAACATTCTAATTGGTTCTCGTGGTGCAGTCAAGCTAGGGGATTTTGGTGTATCTGCTTGTCTTTTTGATTCAGGTGACAGACAACGCACAAGGAATACATTTGTGGGGACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGATTTCAAAGCTGATATCTGGTCATTTGGCATAACAGCATTGGAGCTTGCACATGGTCATGCTCCTTTCTCTAAGTATCCACCTATGAAGGTACTGCTTATGACATTGCAAAATGCACCGCCTGGTCTTGATTATGAACGGGATAAGAAGTTCTCTAAGTCATTTAAGCAGATGATTGCTAGCTGCTTAGTAAAAGATCCTTCAAAACGACCCTCTGCAAGTAAGTTGTTAAAGAATTCCTTCTTTAAGCAAGCTCGCTCAAGTGATTATATTGCACGAACACTTTTGGAGGGGCTGCCTGCTTTAGGTGATCGCATGCAGGCTCTAAAGGCAATTGTCCTACCTCAGAGGAAAGAAGAAGATATGCTTGCACAAAAACAAATGCCGGATGGTCAGATGGAGGAATTATCACAGAATGAATACAAGCGAGGCATTAGTAGCTGGAACTTCAATCTTGAAGATATGAAAGCTCAGGCTTCATTGATACAGGATTATGATGACCCAATATCTGAAATCAGTCTTGGAGGAAGTTCAAATTCTTCATCTACAATTGATACACAAGATAAGCAATCACCTAGTGCAAACCCCTCTCAAATTGTTGATATGGAATATAACGATGAGATGCAAAATCAATCAGCTTCTGTTCCAGTAGTGGATTCCACATCAATTGATGCCAAGATTAGGAGTGAAAAGTCTGATGATGACTTCAGTATCAGCAGTTCAAGCTATGAACATCACTTTTCACAGAGTTCTTCACCCCTTCTTGATGATCATGTGGTGGACCATAGTTTGGGTGAAAAATGTGAGATGGAGAATGGTGGAAGACAGGTGGAGGCCATGGCTACTCATTCTTTTCATAGAAGATGCTCATCAAGTATCTTACCTGAAGTTACTCCCCTAACTACTCGAGGAGAAATACAGGAGAAGGTACATGATCATATTGCTTCATTGGTCACACGTCTTGATTGTCAACTTCAAAGGGGCATCACAATAAATCTGTTGTTGCAGCAGCTAATGAGGCTTGCATATAGGGCTCCTGTCTTTCTTAATAATAAATCTGTTCTTGCAGCAGCTAATTCTGATGACCCTGAAGAGAAAGTAAAGGTACCAGTTGTTCAGCAGAAAGGACGCTTTAAGGTTACATCTGAGAATGTTGGCATAGAAAAGGTCATTAGCCCACAGAATGCAGCCCCTCTACCTTCAATTTTACCATTGTCATCGACATCTGAGGCTACACCATCAAATTATTCTGGCTCTTCTTTTCACACAGTATTGCATGCTCTGATGCTGTCAAATATTCAACAAAGGGACGCCATCTTATATTTAATGAAGCAAGTAACTGCTGGTGACTTTACAGTTGATGGAGCATCCAACCTAGCACAGACTGCGGTGATTGAGAAATCTTTGCTTGAAATATATCATGATAAGGAGAAAGAGCTACTTCATGAGATAGCTGACTTGCAGAGGAGGTGTGATTGCACTGTCCGAATGGATACTTGGAGCAGGATTTCGGAGGTGATTCCATTGTTCAAGTGTGATAAGAACTTAATCATAGTTCTCCTAGAAGTGCAGATTCATTGTTGA 2169 0.42 MKDMEKKKFPIGPEHYELYEEVGQGVSAYVHRALCIPLNEIVAIKILDFERDNCDLNNISREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMAGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKAGNILIGSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKNSFFKQARSSDYIARTLLEGLPALGDRMQALKAIVLPQRKEEDMLAQKQMPDGQMEELSQNEYKRGISSWNFNLEDMKAQASLIQDYDDPISEISLGGSSNSSSTIDTQDKQSPSANPSQIVDMEYNDEMQNQSASVPVVDSTSIDAKIRSEKSDDDFSISSSSYEHHFSQSSSPLLDDHVVDHSLGEKCEMENGGRQVEAMATHSFHRRCSSSILPEVTPLTTRGEIQEKVHDHIASLVTRLDCQLQRGITINLLLQQLMRLAYRAPVFLNNKSVLAAANSDDPEEKVKVPVVQQKGRFKVTSENVGIEKVISPQNAAPLPSILPLSSTSEATPSNYSGSSFHTVLHALMLSNIQQRDAILYLMKQVTAGDFTVDGASNLAQTAVIEKSLLEIYHDKEKELLHEIADLQRRCDCTVRMDTWSRISEVIPLFKCDKNLIIVLLEVQIHC 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1807 722 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Dere12g1807 722 MobiDBLite consensus disorder prediction 419 435 - -
Dere12g1807 722 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1807 722 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Dere12g1807 722 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 336 - -
Dere12g1807 722 MobiDBLite consensus disorder prediction 367 436 - -
Dere12g1807 722 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1807 722 Gene3D Phosphorylase Kinase; domain 1 4 93 - -
Dere12g1807 722 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1807 722 Coils Coil 665 685 - -
Dere12g1807 722 MobiDBLite consensus disorder prediction 367 414 - -
Dere12g1807 722 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 692 IPR047173 GO:0043539
Dere12g1807 722 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Dere12g1807 722 Gene3D Transferase(Phosphotransferase) domain 1 97 307 - -
Dere12g1807 722 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1807 Dere-ChrDere12 30745012 30751608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1807 4 685 MAP Kinase Kinase Kinase Kinase AT1G79640 60.143 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Dere12g1807 Pkinase 5.4e-57 CL0016