Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1792 ATGATCATCAACGTGAAGGCGTCGACGATGGTGCGGCCGGCGGAGGAGACGCCGCGTCGGGCGCTGTGGAACTCTAACGTCGACCTGGTGGTGCCAAACTTCCACACCCCCAGCGTGTACTTCTACAGGCCCACCGGTGCCTCCAATTTCTTTGATGCCAAGGTTATGAAGGAGGCTCTGAGCAAGGCTCTTGTTCCGTTCTACCCAATGGCCGGGCGGCTCCGTCGAGACGACGACGGTCGTGTCGAGATTGATTGCAACGGCGAAGGAGTGCTCTTGGTCGAGGCCGAGAGCACCGGCGTCATCGAAGATTTCGGCGACTTTGCTCCCACCCTTGAGCTCCGGATGCTTATCCCCACCGTCGATTATTCCGGCGGAATCGAAACGTATCCATTGTTAGTGTTGCAGGTAACATATTTTAAGTGTGGGGGTGTCTCACTCGGGGTTGGCATGCAACACCACGTTGCAGATGGGTTTTCTGGTCTCCACTTTATCAATTCATGGTCAGACATGGCTCGTGGCTTGGACCTTACCGTCCCACCCTTCATTGATCGGACACTACTTCGAGCCCGAGACCCTCCTCAACCTGTTTTTGACCACATTGAATACAAGCCCGCTCCAGCCATGAAGACTCCTCTGCAACCCACGAAACCAGGTGCAGACGGAGGAGCAGTAGTTTCTATTTTCAAATTGACTCGTGACCAGCTCAATACACTGAAAGCCAAGTCTAAAGAAGATGGAAACACAGTGAACTACAGCTCTTATGAGATGCTGTCTGGTCATGTGTGGAGAAGTGTGTGCAAGGCACGTGCACTTCCCGAAGATCAAGAGACTAAATTGTACATTGCAACTGATGGCCGGTCTAGATTGCAACCACCCCTCCCACCAGGGTACTTCGGCAATGTGATCTTCACAACCACACCAATAGCTATCGCAGGTGATCTCATGTCAAAGCCAACGTGGTTTGCTGCGAGCAGGATTCATAATGCACTTTCAAGGATGGACAATGAGTATTTGAGATCAGCTCTGGACTATCTAGAGCTTCAACCTGATTTGAAAGCTCTTGTTCGTGGAGCACATACTTTTAGGTGTCCAAATCTTGGAATCACTAGTTGGGCTAGGCTTCCAATACATGATGCTGATTTTGGATGGGGAAGGCCTATATTTATGGGACCTGGTGGGATAACATATGAGGGGCTGTCTTATATAATTCCAAGCTCAACAAATGATGGGAGCTTATCAGTGGCAATAGCTCTACAGCCTGAGCATATGAAGGTGTTCGAGGAATTGTTGTATGACATTTGA 1305 0.5027 MIINVKASTMVRPAEETPRRALWNSNVDLVVPNFHTPSVYFYRPTGASNFFDAKVMKEALSKALVPFYPMAGRLRRDDDGRVEIDCNGEGVLLVEAESTGVIEDFGDFAPTLELRMLIPTVDYSGGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGFSGLHFINSWSDMARGLDLTVPPFIDRTLLRARDPPQPVFDHIEYKPAPAMKTPLQPTKPGADGGAVVSIFKLTRDQLNTLKAKSKEDGNTVNYSSYEMLSGHVWRSVCKARALPEDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAIAGDLMSKPTWFAASRIHNALSRMDNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMGPGGITYEGLSYIIPSSTNDGSLSVAIALQPEHMKVFEELLYDI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1792 434 Gene3D - 221 434 IPR023213 -
Dere12g1792 434 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Dere12g1792 434 FunFam Tryptamine hydroxycinnamoyl transferase 212 432 - -
Dere12g1792 434 Gene3D - 1 205 IPR023213 -
Dere12g1792 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 431 - -
Dere12g1792 434 Pfam Transferase family 3 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1792 Dere-ChrDere12 30557953 30561602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1792 1 434 Monolignol Biosynthesis Gene Families AT5G48930 79.724 0.0 735