Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1791 ATGGGGGTATACCTCAGCAGCCCGAAAACAGAGAAGGCCTCTGAAGATGGCGAGAATGACAGGCTTCGCTATGGTTTATCTTCCATGCAGGGGTGGCGTAAAACCATGGAAGATGCTCATGCAGCCCATCCTGATTTAGATGAGTCTACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTGCTAAATTCTGTGCCAAGTATCTACACCAAGAGGTGCTTAAGCAACAAGCTTATTTAGCTGGAGATTTAGGCACATCTTTACAAAACTCTTTCCTCAGAATGGATGAGATGATGAGTGGACAACGAGGGTGGAGAGAATTAGCAGTCTTGGGAGAAAAAACTAAAAAGTTGTTTGGTATGCGAGGATGGTTTATATGGTCTCCCAAGAGTGGTGCAGTCAATGGCCATGTTGATGACTGGGCTTTTGAGGAGGGGCCCCATTGTGATTTCAGGGGACCAAACGCTGGATGTACAGCTTGTGTTGCAGTCATCCGAGGCAACCAACTTCTTGTTGCAAATGCTGGTGATTCTCGCTGTGTTTTATCAAGGAAGGGTCAGGCACAAGATTTAACTAAAGATCACAAGCCCAACCTAGAGGCTGAGAAAGATAGGATTCTAAAAGCTGGTGGTTTTATCCAATTTGGACGGGTCAATGGAAGTTTAAACTTGGCTCGAGCAATTGGAGACATTGAATTCAAGGGAAACAAGGATTTGCCTGCTGAAAAGCAGATTATAACTGCTGATCCAGACATAACTTCTGTTGAGCTTTGCTATGATGATGAGTTTCTTGTGATAGCTTGTGATGGGATATGGGATTGCATGACAAGCCAACAGCTTGTGGACTTCATACATGAACAGTTAAAGACAGAGAGCAAGCTTAAAGTGATTTGCGAGAGAGTAATTGACTGGTGCTTGGCACCAGCCGCTGGTTGTTTGGGATGTGATAACATGACCATGGTCTTGATTCAGTTCAAAAGGCCTTCAAATCCAGGTGCTTCTGTCATGTACCAGCAAGCCTCAGTCATCTGCAGATAA 1047 0.4451 MGVYLSSPKTEKASEDGENDRLRYGLSSMQGWRKTMEDAHAAHPDLDESTSFFGVYDGHGGKAVAKFCAKYLHQEVLKQQAYLAGDLGTSLQNSFLRMDEMMSGQRGWRELAVLGEKTKKLFGMRGWFIWSPKSGAVNGHVDDWAFEEGPHCDFRGPNAGCTACVAVIRGNQLLVANAGDSRCVLSRKGQAQDLTKDHKPNLEAEKDRILKAGGFIQFGRVNGSLNLARAIGDIEFKGNKDLPAEKQIITADPDITSVELCYDDEFLVIACDGIWDCMTSQQLVDFIHEQLKTESKLKVICERVIDWCLAPAAGCLGCDNMTMVLIQFKRPSNPGASVMYQQASVICR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1791 348 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Dere12g1791 348 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Dere12g1791 348 Pfam Protein phosphatase 2C 157 313 IPR001932 -
Dere12g1791 348 CDD PP2Cc 23 328 IPR001932 -
Dere12g1791 348 MobiDBLite consensus disorder prediction 1 20 - -
Dere12g1791 348 PANTHER PROTEIN PHOSPHATASE 2C 17 327 IPR015655 GO:0004722|GO:0006470
Dere12g1791 348 SMART PP2C_4 13 326 IPR001932 -
Dere12g1791 348 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Dere12g1791 348 Gene3D - 1 329 IPR036457 -
Dere12g1791 348 SUPERFAMILY PP2C-like 3 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1791 Dere-ChrDere12 30528960 30534700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1791 1 337 PP2C-type Phosphatase Gene Family AT2G25070 70.118 0.0 512