Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1788 ATGATGCGACGTTGTGATCTACCTGCACGTGATCTTCGCCTACTTGATCCTCTGTTTGTGTACCCATCAACAATCCTTGGTAGAGAAAAGGCAATTGTTGTGAACCTTGAGCAGATAAGGTGTATTATTACAGCAGATGAGGTTCTTCTTTTGAATTCCCTAGATAGTTATGTATTGCACTATGTCATGGAGTTGCAACGGCGACTGACTTCAACTGGGGTTGGTGAGGTTTGGCAGTCAGACAATTCTGACGTGAGCCGAAGGAGAGGAAGTAGGAATTTAGACAATGTTTTTAACAACACATCCCCTGATTATTTGCCCTTTGAGTTTAGGGCTCTTGAAGTTGCCTTGGAGGCGGCATGCTCATTTCTTGACAATCAGGCAGCGGAGTTAGAAATCGAGGCATATCCATTACTGGATGAATTAACATCAAAGATCAGTACACTAAATTTGGAACGTGTCCGTCGGCTGAAAAGCAGACTTGTTGCCCTGACTAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTAATGGATGATGACGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGGCGGATGGAGTCATCATTTTGTGGAGACCATCAGTCTTTGGTGGGATATAGATCAATTGATGGTGCATCCATTTCTGCTCCAGTTTCTCCCGTTTCATCACCTCCTGATGCTCGGAAGCTTGAGAAGTGTTTGAGCATTGCAAGGAGTCGACATGAAAGCATGAGGAGTACAGAAAGTGCCACAGAAAGTATAGAAGAGCTTGAGATGTTGCTAGAAGCATACTTTGTTGTAATTGACAGCACCCTGAACAAACTGACATCGTTGAAAGAGTACATTGACGACACAGAAGATTTCATTAACATTCAACTGGATAATGTACGTAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACGGCAACATTTGTGGTCGCCATCTTTGGTGTGGTAGCAGGAGTATTTGGAATGAACTTTGAAATCCCATTATTTAATGAACCCTCTGCATTCAATTGGGTCCTTATAATTACAGGAATTTGTGGGGTCGTCATATTTAGTGCGTTTGTGTGGTTCTTCAAATACAAAAGGCTCATGCCCCTATAG 1125 0.4249 MMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTSTGVGEVWQSDNSDVSRRRGSRNLDNVFNNTSPDYLPFEFRALEVALEAACSFLDNQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMESSFCGDHQSLVGYRSIDGASISAPVSPVSSPPDARKLEKCLSIARSRHESMRSTESATESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGVFGMNFEIPLFNEPSAFNWVLIITGICGVVIFSAFVWFFKYKRLMPL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1788 374 Gene3D Magnesium transport protein CorA, transmembrane region 312 372 - -
Dere12g1788 374 Coils Coil 154 181 - -
Dere12g1788 374 CDD Mrs2_Mfm1p-like 1 371 IPR039204 -
Dere12g1788 374 Gene3D Magnesium transport protein CorA, transmembrane region 59 305 - -
Dere12g1788 374 Pfam CorA-like Mg2+ transporter protein 262 362 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Dere12g1788 374 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 372 IPR039204 -
Dere12g1788 374 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 311 364 IPR045863 -
Dere12g1788 374 FunFam Magnesium transporter MRS2-1 312 372 - -
Dere12g1788 374 Gene3D - 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1788 Dere-ChrDere12 30516332 30518780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1788 1 374 MRS2 Gene Family AT1G16010 86.631 0.0 641