Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1783 ATGCCTTCTAGACCCTTCCCTCCTAGTCCCAACCCTCCAAGTCCAAGTCTTTTTATTAAAACCAGAGTTCTCTTCCTCGCACTCACAATCTCCGCGTCTGTTGTAATCTTCTGCTCAATCCTCTACTTCCTTTATCACCTATGGCATTCTATTGTACACAGAGCTAAAACTATCCCCTTTGATGCAAGTGCTCCTTTAAAGCTCGAAAGATTCTCATACAAAGAATTGAAGCAAGCCACCAATGGCTTTGACGCCGCCAATGTAATTGGTAAAGGGGGTTCTGGAACTGTTTTCAAGGGAACACTTAAAGATGGGAAATTGATTGCTATTAAGCGGTTAGACGCCTTGTCTTTGCAGACAGAGCGAGAGTTTCAGAATGAGCTTCAGATTCTTGGAGGGTTAAGATCTCCTTTTATTGTGACCCTTTTGGGGTACTGTGTGGAAAAGAACAAGAGAGTGTTGGTGTATGATTACATGCCCAATAGAAGCTTGCAGGAATCCCTCTTTGGAGATGATGGGTCCTTGAGTTTGGGCTGGGAGAGGAGGTTTCACATCATTTTGGATGTTTCTAGGGCTCTGGAATTCTTGCACCTTGGGTGCGATCCTCCAGTGATTCATGGTGATGTTAAGCCAAGCAATGTTCTGCTTGATTCAGAGTACCGTGGGAAGATTTCAGACTTTGGATTGTCAAGGATTAAAGTGGATAATGAATTTGGTGTAGATTTGTTCAGCCAGGACTTGGGGAGGAGTCAAGAGCTGTGGAAGAGCCAAGAGCTTTCAGGTAACTTAACTGCTGAAACTCCAACTCCAGCTATTGGTACACCAGTTGAGAGTGTTAATGAAGTAGATTTTGCTTTAGCTTTGCAAGCATCTTCTTCGTCTAAAAATAGTAAGACATGTTTTAATGTTAAAGCTTTGAACTTGAATTCTTTCAATTATAATGCCAATATTGCCAGTGAGAGCGAAATCAGGAGCTGTAATGTAAAAGGAAAGGAAATATCAACTTTCGATATTGGTGGAGATGATTGGAATAATAAATTTGTTCCTTATGATGATGAGTTTTCTAGCATTGATCACAGTAAGGAGTTAAGTACAGTAAATGCTTCGTCAATGGATGATGAAAAGGTAAATGGGAAACAATGGGGAAAGGATTGGTGGTGGAGACAGGATGGAACTGATGAATTATGTAGTAGAGACTATGTAATGGAGTGGATAGGAAGTCAAATTTGTCCATCAAACCAGGATTGGGATGAAGAAAAGAAGAATATCCATGAGAAGACAGAGTTGGAAACTTCAAGTCCAATAGATCATAAAGCAGATGAAGCAAATGGGCCCCAATTTCAAGCATTTGGAATGGGAGAAGCAGATCATGTGGTTGAGAAGAAAGAATCAAGGGGGAAGAAAAATCGCAAGAAGAAGCACAGGAAGATGCAAGAGTGGTGGAAAGAAGAGCACCTTGCTGAATTAAGCAAGAAGAGTAGAAAGCTGAAAAATCTTCAGAGTAAGTGGAAGAAAGGCTTCAAAGTGCCACATTTTGATCTGGGAAGAAGGTTTTATCTTTGCAGGCGTAAAAACTTTGCAGAAGAGACTCAGGATGATTGTGATCAAAATGGGGAGTTTAGTTTCAGAAGAGGTTGGAGGAAGAAAAGTACTCGTTCCATTGGCAGCGACATGTGGAGTGGAGATCTTTTCAGCCGTGAGCTCAGCAGCACAACTAGCATGAGAGGAACGCTCTGCTATGTTGCACCAGAATATGGCGGGTGTGGGTACTTAATGGAGAAAGCTGACATTTACAGTTTAGGAGTTTTAATCCTTGTGATTGTGTCAGGTAGAAGACCACTACATGTTCTTGCATCTCCCATGAAGCTAGAGAAAGCCAACTTAATAAGCTGGTGTAGGCACTTGGCTCATGCTGGTAACATATTAGAGCTAGTAGATGAGAGACTGAAAGATTACAACAAGGAGCAAGCAAGCTTGTGTATAAACTTGGCACTTACTTGCTTACAGAAAATTCCAGAGTTGAGGCCAGATATTGGTGATATTGTTAAGATTTTGAAGGGGGAGATGGATCTTCCACCACTTCCATTTGAGTTTTCTCCATCTCCACCTTCCAAATTTTACAGCAGATCAAGGGCAAAACAGAAGAGCACTACAGAACAGGCTTTGCAATTCTGA 2175 0.4156 MPSRPFPPSPNPPSPSLFIKTRVLFLALTISASVVIFCSILYFLYHLWHSIVHRAKTIPFDASAPLKLERFSYKELKQATNGFDAANVIGKGGSGTVFKGTLKDGKLIAIKRLDALSLQTEREFQNELQILGGLRSPFIVTLLGYCVEKNKRVLVYDYMPNRSLQESLFGDDGSLSLGWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSEYRGKISDFGLSRIKVDNEFGVDLFSQDLGRSQELWKSQELSGNLTAETPTPAIGTPVESVNEVDFALALQASSSSKNSKTCFNVKALNLNSFNYNANIASESEIRSCNVKGKEISTFDIGGDDWNNKFVPYDDEFSSIDHSKELSTVNASSMDDEKVNGKQWGKDWWWRQDGTDELCSRDYVMEWIGSQICPSNQDWDEEKKNIHEKTELETSSPIDHKADEANGPQFQAFGMGEADHVVEKKESRGKKNRKKKHRKMQEWWKEEHLAELSKKSRKLKNLQSKWKKGFKVPHFDLGRRFYLCRRKNFAEETQDDCDQNGEFSFRRGWRKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHAGNILELVDERLKDYNKEQASLCINLALTCLQKIPELRPDIGDIVKILKGEMDLPPLPFEFSPSPPSKFYSRSRAKQKSTTEQALQF 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1783 724 PANTHER OS07G0586332 PROTEIN 1 714 IPR044576 -
Dere12g1783 724 SMART serkin_6 83 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1783 724 MobiDBLite consensus disorder prediction 700 724 - -
Dere12g1783 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Dere12g1783 724 FunFam Receptor-like serine/threonine-protein kinase At4g25390 543 691 - -
Dere12g1783 724 FunFam putative receptor-like protein kinase At1g80870 159 270 - -
Dere12g1783 724 ProSiteProfiles Protein kinase domain profile. 83 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1783 724 MobiDBLite consensus disorder prediction 703 724 - -
Dere12g1783 724 Gene3D Transferase(Phosphotransferase) domain 1 159 271 - -
Dere12g1783 724 Gene3D Transferase(Phosphotransferase) domain 1 546 691 - -
Dere12g1783 724 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Dere12g1783 724 Gene3D Phosphorylase Kinase; domain 1 59 158 - -
Dere12g1783 724 Coils Coil 482 502 - -
Dere12g1783 724 FunFam Receptor-like serine/threonine-protein kinase At4g25390 52 158 - -
Dere12g1783 724 SUPERFAMILY Protein kinase-like (PK-like) 64 709 IPR011009 -
Dere12g1783 724 Pfam Protein kinase domain 86 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1783 Dere-ChrDere12 30480921 30483095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1783 554 685 Receptor kinase-like Gene Family AT3G58690 31.343 5.86e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Dere12g1783 Pkinase 1.9e-27 CL0016