Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1773 ATGGCAAATCAGGGTCACCTACACAATCTTGACCAGCTTTCACATTTTGGCGATGCTTCGCAATTCAAGCCTAATAAGAATCTTGCTACGCGTAGCTCTCCTCTGTATCGAAACTTCACTGTTTCTGATGTCAAAACAGTTGTTTTTGTGTTTATAGCAGCTGCAAGTTGGCCAAAACCACCATTAGAGACGGTGGAGAAGCCATTGGAGGTGGTGCTGGTGATAAGAGAGTATGATGAAGAGAGACACAACGTGGCAGTAGAGAAAATGGAGAGTCTTTGTGAAGCTGGGCAGAAGGGAAAGCCATCTCTTGTCACTGACCTTATGGGTGACCCCATATGTCGTGTCCGTCACTTCCCAATACATATCATGCTGGTTGCAGAATATGGAGAAGAAGGAGAAATTGTTGGGGTGATAAGGGGATGTGTGAAGACAGTTACAAGAGGGAGTTCAGCCTATGTAAAGGTGGCTTATCTTTTGGGGCTCAGGGTCTCCCCTACACACAGGAGACTTGGCATTGGCACAAAATTAGTTGAACATTTGGAGGAGTGGTGCAAGCAAAAGGGGGCAAAGTATGCATATATAGCAACTGATTGTACAAATGAGCCATCCCTCAATTTGTTCACAAAAAAATGTGGGTACTCGAAGTTCAGAACTCTAACCATGCTAGTGCAACCTGTTCATGCTCACAACAAAACCATGAGCTCAAGCATTGCCGTGGTTCGCCTCCCACCATGCCTAGCTGGGTCCATATATAACCATTTGTTTGCCAGTTCAGAATTTCACCCTAAAGACATTGAGTTAATCTTGTCTAACAAGCTAAATTTAGGTACCTTCATGGCTATCCCCAAGAGGTACCTCGCCAAGTGGGATCCAAAAACAAGCATTCTTCCTCCAAATTTTGCCATATTAAGTGTGTGGAACACTAAGGAAGTGTTCAAGTTGCAAGTGAAGGGAATGTCACCATTAGCACACGCCTGTTGCGTAGGGACAAGGTTATTGGATGCATGGATGCCATGGCTGAGGCTACCTTCCTTTCCTGATGTGTTTAGGCCATTTGGGATTTATTTCTTGTACGGATTACACATGGAAGGGAAGAATGGTAGGTTTCTCATGAGGTCTTTGTGTGCATTTGTGCACAACATGGCAAGGGATGATGGCGGTTGTGGGGCTATTGTGGCTGAATTGGGCCAAAGGGACCCAGTTAGAGACGCAGTCCCACATTGGAAAAAGCTCTCATGGGCCGAGGACACATGGTGCATCAAGAAACTTGAAAAATGTGGGCCGTATGATTGGATCACATCTAGATCCTCTTCCCCAGTAATTTTCGTTGACCCTCGTGATTTTTGA 1350 0.4526 MANQGHLHNLDQLSHFGDASQFKPNKNLATRSSPLYRNFTVSDVKTVVFVFIAAASWPKPPLETVEKPLEVVLVIREYDEERHNVAVEKMESLCEAGQKGKPSLVTDLMGDPICRVRHFPIHIMLVAEYGEEGEIVGVIRGCVKTVTRGSSAYVKVAYLLGLRVSPTHRRLGIGTKLVEHLEEWCKQKGAKYAYIATDCTNEPSLNLFTKKCGYSKFRTLTMLVQPVHAHNKTMSSSIAVVRLPPCLAGSIYNHLFASSEFHPKDIELILSNKLNLGTFMAIPKRYLAKWDPKTSILPPNFAILSVWNTKEVFKLQVKGMSPLAHACCVGTRLLDAWMPWLRLPSFPDVFRPFGIYFLYGLHMEGKNGRFLMRSLCAFVHNMARDDGGCGAIVAELGQRDPVRDAVPHWKKLSWAEDTWCIKKLEKCGPYDWITSRSSSPVIFVDPRDF 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1773 449 FunFam Putative N-acetyltransferase HLS1 88 219 - -
Dere12g1773 449 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 113 220 IPR016181 -
Dere12g1773 449 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 72 449 - -
Dere12g1773 449 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 73 228 IPR000182 GO:0016747
Dere12g1773 449 Pfam Acetyltransferase (GNAT) family 125 214 IPR000182 GO:0016747
Dere12g1773 449 CDD NAT_SF 124 195 - -
Dere12g1773 449 Gene3D - 73 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1773 Dere-ChrDere12 30360026 30363680 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere12g1773 Acetyltransf_1 2.9e-19 CL0257