Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1770 ATGGATAATTCATCATGGATGAACAAGTCCCTGGACCTCAACATAAATCCTAATTCCAGAGTTCATGAAGAAGTTCCTAAAAACGAAGTGGAAAGCAATTTTTTTGCATTGAAGTTGACGTCTCCTGCAAAAAAAGAGTCCACTGGTAACTTGGAGGAGGAATTGAAGAGGGTGAGTGCAGAAAACAAGAAGTTGACTGAAATGCTTACAGAGTTGTGTGAGAACTACAATACTTTGAGGAACCACCTGATGGAATATATGAGAAAGAATTCAGAAAAGGAACTCAGCCCATCGAAGAAAAGGAAATCTGAAGGTAGCAATAACAATAGCAATCCAGTTGGGGTTAATGGAAACTCTGAGAGCAGCTCAACTGACGGAGAAGAATCAAGCAAGAAACCAAGGCAAGAGATCATCAAAGCAAAAATTTCTAAAGTATATGTCAGGACAGAAGCATCTGATTCAAGCCTTATTGTGAAGGATGGATATCAGTGGAGGAAATACGGGCAAAAGGTGACCAGAGACAACCCCTGTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAACCTGCCCTGTGAAAAAGAAGGTCCAAAGAAGTGTGGATGATCAATCCATTGTGGTGGCAACTTATGAAGGAGAGCATAATCATCCACACCCTTCTCAAACGGAGGCAACATCAGGTTCTAGCCGTAGTGTGACTCTTGGCATGGTACCTTGTTCGTCGTCTCTGAGCCCTTCTCCTCCTAAAGTTACACTTGACATGACAAAATCTAAGTCCTTCAATGAATCGAAGAATCTGGCACCGAAACTTGATTCGTCGGAAGTCCCTCAGGTTTTGGTGGAGCAGATGGCTACCTCCTTAACCAAGGATCCAAATTTTAGATCAGCACTTCTTGCAGCCATTTCAGGAAGAATGTTGCACAATAATTAG 930 0.4226 MDNSSWMNKSLDLNINPNSRVHEEVPKNEVESNFFALKLTSPAKKESTGNLEEELKRVSAENKKLTEMLTELCENYNTLRNHLMEYMRKNSEKELSPSKKRKSEGSNNNSNPVGVNGNSESSSTDGEESSKKPRQEIIKAKISKVYVRTEASDSSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPTCPVKKKVQRSVDDQSIVVATYEGEHNHPHPSQTEATSGSSRSVTLGMVPCSSSLSPSPPKVTLDMTKSKSFNESKNLAPKLDSSEVPQVLVEQMATSLTKDPNFRSALLAAISGRMLHNN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1770 309 MobiDBLite consensus disorder prediction 90 135 - -
Dere12g1770 309 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g1770 309 MobiDBLite consensus disorder prediction 211 267 - -
Dere12g1770 309 Coils Coil 48 82 - -
Dere12g1770 309 Pfam WRKY DNA -binding domain 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g1770 309 MobiDBLite consensus disorder prediction 102 124 - -
Dere12g1770 309 SUPERFAMILY WRKY DNA-binding domain 156 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g1770 309 FunFam WRKY transcription factor 40 143 220 - -
Dere12g1770 309 Gene3D WRKY domain 141 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g1770 309 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g1770 309 MobiDBLite consensus disorder prediction 219 267 - -
Dere12g1770 309 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 33 305 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1770 Dere-ChrDere12 30345137 30346524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1770 3 309 WRKY Transcription Factor Family AT1G80840 50.314 6.99e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere12g1770 WRKY 3.7e-23 CL0274