Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1769 ATGTCGGGCCAAAGCCAGCGTCTTAATGTGGTCCCCACTGTGACGATGCTTGGAATCATGAAAGCTCGTCTTGTCGGAGCGACGCGAGGCCACGCTCTTCTCAAGAAAAAGAGCGATGCCTTGACCGTACAGTTCCGTCAGATTCTGAAGAGGATAGTGTCCACCAAGGAAACAATGGGGGAGATCATGAAAACCTCCTCTTTTGCTTTAACAGAAGCCAAGTACGTTGCTGGTGACAACATCAAGCACGTTGTGCTTGAGAATGTTCGAGAAGCATCACTTAAGGTTCGCTCTAGACAAGAGAATGTGGCTGGTGTTAAGCTCCCCAAGTTTGAATATACAAATGACGGCGAGATCAGTAAGAATGACCTTACAGGGTTGGCAAGAGGTGGCCAACAAGTTCAGCAATGCCGTGCTGCTTATATAAAGGCAATTGAAGTTCTTGTTGAGCTTGCTTCACTTCAGACCTCGTTCTTGACGCTTGATGAGGCAATCAAGACAACGAATCGGAGAGTGAATGCGCTTGAGAATGTGGTGAAGCCAAGAATAGAGAATACCATTTCTTATATAAAGGGAGAGTTGGATGAGCTGGAAAGAGAGGATTTCTTTAGGTTGAAGAAGATACAGGGCTACAAGAAGAGAGAAATAGAGAAGCAGATGCAGTCAGCTAAGAATTTTGCTGAGGAACAGTTTGCTGAGAAGCTGGCGTTGCAGAGAGGAATTTCAATGAGTTCAGCTCACAACTTGGTGTCTGCAACCACAGCCAAAGACGAGGATATCATTTTCTGA 789 0.4575 MSGQSQRLNVVPTVTMLGIMKARLVGATRGHALLKKKSDALTVQFRQILKRIVSTKETMGEIMKTSSFALTEAKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEISKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRIENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQSAKNFAEEQFAEKLALQRGISMSSAHNLVSATTAKDEDIIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1769 262 Gene3D - 1 199 - -
Dere12g1769 262 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
Dere12g1769 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
Dere12g1769 262 FunFam V-type proton ATPase subunit D 1 199 - -
Dere12g1769 262 Pfam ATP synthase subunit D 17 209 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1769 Dere-ChrDere12 30334739 30335527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1769 1 262 Primary Pumps ATPases(2) AT3G58730 78.244 6.80e-155 430