Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1768 ATGGCCCAGCAGGACGACCAAACCCTGACTCAGAACGACGCCCCCAGGAACATTCTCTTTGACAAGTACGAGATGGGGAGGCTTCTGGGCCAGGGCAACTTCGCCAAGGTCTATTACGGCAGAAACCTTGTCACCCACGAGAGCGTAGCTATCAAGGTCATCAAGAAAGAGAAGCTGAAGAAAGAGAGGCTTGTGAGACAGATCAAGCAGGAAGTCTCCGTGATGCGATTGGTCCGACACCCCCACATCGTCGAGCTGAAGGAAGTTATGGCCACGAAAGGCAAGATCTTTCTGGTCATGGAATACGTCAAGGGTGGGGAATTGTTCGCCAAGGTTGCAAAAGGGAAGCTGAAGGAAGACGTCGCAAGAAAATACTTCCAGCAATTGATCAGCGCCGTTGATTTCTGTCACAGCCGTGGAGTCACTCACCGTGATTTGAAGCCCGAGAATCTGCTCCTGGACGAAAACGAAGATCTCAAGGTTTCCGATTTTGGGTTGTCGGCGTTGCCGGAGCAACGCCGGTCCGACGGAATGCTCGTGACGCCGTGTGGGACGCCGGCTTATGTGGCGCCGGAGGTACTTAAGAAGAAAGGGTATAACGGGTCAAAAGCAGATATCTGGTCCTGTGGTGTAATTCTCTTTGCTCTGCTTTCTGGGTATCTGCCGTTTCAGGGTGAGAATATTATGAAGATTTACAAGAAGGCATTCAACGCCGACTACGAATTCCCAGCTTGGATATCACCTGGAGCTAAGAACTTGATCTCTAATCTTCTAGTTGCGGACTCAGAAAAGAGATATGCTATGTCAGATATCATGAAGGACCCATGGTTTCAAATCGGGTACATGAGACCAATCGCGTTTTCGATGAAGGAGGAAGCAGGCTTTGATTTCGACGAGGAGAATAAAGATAAAGATGAAGAAGCGGAAGTAGCGACAAGAGCAGAAAAGCCATCTCGACCGTTCTACAATGCGTTCGAGATAATCTCGTCGTTGTCAAATGGGTTTGATCTGAGAAGCTTGTTTGAGACACGGAAGAGATCCCCATCTATGTTTCTATCAAAGTTTTCAGCTTCCGCAGTTGTGGCGAAGCTTGAGACGGTGGCGAAGAAGCTGAATTTTAGGATCACAGGGAAGAAAGATTTCAAGGTGAGGATGCAGGGGGAAACGGAGGGAAGAAAGGGGAAGCTGGCGATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTCTCCAAGTCGGCCGGCGATACACTCGAGTACATAAAGTTCTGTGAGGAGGAAGTGAGGCCTGCACTGAAAGACATAGTCTGGAGTTGGCAAGGAGACAGTAAGAACTGCCATCAGAATTAA 1362 0.4985 MAQQDDQTLTQNDAPRNILFDKYEMGRLLGQGNFAKVYYGRNLVTHESVAIKVIKKEKLKKERLVRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFAKVAKGKLKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYNGSKADIWSCGVILFALLSGYLPFQGENIMKIYKKAFNADYEFPAWISPGAKNLISNLLVADSEKRYAMSDIMKDPWFQIGYMRPIAFSMKEEAGFDFDEENKDKDEEAEVATRAEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSMFLSKFSASAVVAKLETVAKKLNFRITGKKDFKVRMQGETEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYIKFCEEEVRPALKDIVWSWQGDSKNCHQN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1768 453 SUPERFAMILY Protein kinase-like (PK-like) 19 278 IPR011009 -
Dere12g1768 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Dere12g1768 453 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1768 453 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1768 453 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 437 - -
Dere12g1768 453 FunFam Non-specific serine/threonine protein kinase 15 102 - -
Dere12g1768 453 Gene3D Kinase associated domain 1, KA1 317 442 - -
Dere12g1768 453 Gene3D Phosphorylase Kinase; domain 1 16 102 - -
Dere12g1768 453 Coils Coil 51 71 - -
Dere12g1768 453 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Dere12g1768 453 ProSiteProfiles NAF domain profile. 317 342 IPR018451 GO:0007165
Dere12g1768 453 FunFam Non-specific serine/threonine protein kinase 317 441 - -
Dere12g1768 453 Gene3D Transferase(Phosphotransferase) domain 1 103 281 - -
Dere12g1768 453 FunFam Non-specific serine/threonine protein kinase 16 318 - -
Dere12g1768 453 Pfam NAF domain 321 376 IPR004041 GO:0007165
Dere12g1768 453 CDD CIPK_C 323 437 - -
Dere12g1768 453 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1768 Dere-ChrDere12 30313353 30314714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1768 16 449 CBL-interacting serine-threonine protein kinases AT5G10930 62.989 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere12g1768 Pkinase 3.2e-74 CL0016