Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1765 ATGCCTGCTGCTGCTGACACGTCATCAGGCTTCGGCCAAACTGTGTGCGTCACCGGCGCCGGCGGCTTCATCGCCTCTTGGATTGTCAAGCTTCTCTTGGAGAGAGGATACACTGTCAGAGGCACCGTCAGAAACCCAGATGATTCTAAGAATGCACACCTGAAAGAGTTGGAAGGAGCACAGGAGAGGCTAACTCTGCATAAGGTTGATCTTCTTGATCTCGACTCTGTTAAAGCTGTTGTTAATGGTTGCGATGGTATCATTCATACGGCCTCTCCGGTCACCGACAATCCCGAAGAGATGGTGGAGCCAGCAGTGAATGGCACCAAGAATGTGATCATAGCAGCTGCAGAAGCAAAAGTGCGAAGAGTGGTGTTCACGTCATCAATTGGTGCTGTTTACATGGACCCCAATAGGAGCATGGACGTGGTGGTTGATGAGTCCTGCTGGAGTGATTTGGAGTATTGCAAGAACACCAAGAACTGGTATTGCTATGGGAAGGCAGTGGCAGAGCAAGCAGCATGGGACGAGGCAAAAGAGAGAGGGGTGGACTTGGTTGTGGTGAACCCAGTTTTGGTTCTGGGACCATTGCTCCAAACCACCATAAATGCTAGCACCATTCACATCCTCAAGTATCTCACTGGCTCTGCCAAGACGTATGCGAATGCTACTCAGGCTTATGTGCATGTTAAGGATGTGGCATTAGCCCACATTCTGGTTTACGAGACTCCGTCTGCCTCTGGTCGTTATATATGTTCTGAGAGTTCACTGCACCGTGGAGAGCTGGTTGAAATTCTGGCCAAGTACTTCCCAGAATACCCAATTCCCACCAAGTGTTCAGATGAGAAGAATCCAAGAGTAAAACCCTACACATTCTCCAATCAGAAGCTAAAGGATTTGGGGCTGGAATTTACCCCAGTGAAGCAGTGCCTATACGACACCGTCAAGAACCTGCAGGACAAAGGCCACCTTTCTGTTCCTTCCAAGCAACAAGAATCTGCTGAGATTAAATCCTAG 1017 0.4916 MPAAADTSSGFGQTVCVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDSKNAHLKELEGAQERLTLHKVDLLDLDSVKAVVNGCDGIIHTASPVTDNPEEMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRSMDVVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWDEAKERGVDLVVVNPVLVLGPLLQTTINASTIHILKYLTGSAKTYANATQAYVHVKDVALAHILVYETPSASGRYICSESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRVKPYTFSNQKLKDLGLEFTPVKQCLYDTVKNLQDKGHLSVPSKQQESAEIKS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1765 338 CDD FR_SDR_e 15 302 - -
Dere12g1765 338 FunFam Cinnamoyl-CoA reductase 1 6 337 - -
Dere12g1765 338 Gene3D - 5 337 - -
Dere12g1765 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 315 - -
Dere12g1765 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 318 IPR036291 -
Dere12g1765 338 Pfam NAD dependent epimerase/dehydratase family 15 246 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1765 Dere-ChrDere12 30247614 30250596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1765 12 278 Monolignol Biosynthesis Gene Families AT1G80820 75.281 1.12e-146 412