Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1740 ATGGATCAGCAGTCTTGGGAGACCTGGCTTTCTGATCTGGAAATTGAGATTAATGGAGATTTCTTGAAAGTAGAGAACTCTGGGGATGATGAAGAGTACTTTTTTAGAGATATCCTACAACAGCACTCAACTCTCGCTCCAGAAAGTGAAGCAATATTATCTCCACTTGTGGCGTATGGTGGCGCCACCATCAGCAATTTAGGCAAGAGTGACCACTCTCAACAGTGTCCTTCACAAACACAAACACCACCCACCACTTATATTCTCTCTTTCGATAACTCCACTGTACTACCAGGCATGCCCAAACCTGAAAGTAATTGTTTAATCCATGGCAACAGTAATGTTGTTGCCTCCAAGCCCAAAAGCACAAGAGCTTCTTCACTTTTGTCCTCCGAAGAAACCCACGAAAATCTTAACTATGAAACAGGGGTCAAGAGAGGAACGAAGAAGGCTAGAAGAAGTGCTTCCGAGACAATAGATCACATTACGGCTGAGAGAAAGAGGAGACGGGAGCTCACCGAAAGATTCATAGCACTTTCGGCCACCATCCCTGGCCTGAAAAAGTAG 567 0.448 MDQQSWETWLSDLEIEINGDFLKVENSGDDEEYFFRDILQQHSTLAPESEAILSPLVAYGGATISNLGKSDHSQQCPSQTQTPPTTYILSFDNSTVLPGMPKPESNCLIHGNSNVVASKPKSTRASSLLSSEETHENLNYETGVKRGTKKARRSASETIDHITAERKRRRELTERFIALSATIPGLKK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1740 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 188 IPR011598 GO:0046983
Dere12g1740 188 PANTHER BHLH TRANSCRIPTION FACTOR 63 188 - -
Dere12g1740 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 186 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1740 Dere-ChrDere12 30002070 30003030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1740 144 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 64.583 3.11e-12 62.0