Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1739 ATGGAGCAGCTCCACACTTGGCAGAATTGCTTCTCTCTTGATCATTTGGAAATAATGGATCTGAACTTTGATGAGGATGAGTTCTTTAGTGACATCTTTCTGCCTCCACACGGTCTCTGTTCTCAAACTGAATCAGATCATAACTCCTCCACCGTCACCACTGTCGGATCTGTTGACAACACCGCCTCCGCCGCCGCCGCCGACGTCTGCAACACATCCTTTGATAATAATGGCTTGATCGACAGTAGCAGTAGCAGCAGCTTTTTGAATAGCTACATGGACAACTCAAAGCAACCTGTCTCATCATGCACTCTATCGTTTGATAAATCCGATGTCTTGCCAATTACAAACGAACCTCCATGCCCACAGCTCGACTGTGCTCACACTTCTTCGCCATTGTCGACGTCAAAACGGACGCGAAGGAATCGTAACGTTGAGGCAAGAAACAGGACAAGGTCCTCTTCTGAAACCATTCATCACATTATGACCGAGAGGAAAAGAAGACAGGATCTTACTCAGAAATTCATAGCACTTTCCGCCACCATACCGGGCTTGAAGAAGATGGGGGAGAAATACAACTTGAGACTGAATGATTTACTGAAATACTTGAGGCAGGATCAACTCTTGAAGCCGCTTGATGTGCAGTAG 648 0.463 MEQLHTWQNCFSLDHLEIMDLNFDEDEFFSDIFLPPHGLCSQTESDHNSSTVTTVGSVDNTASAAAADVCNTSFDNNGLIDSSSSSSFLNSYMDNSKQPVSSCTLSFDKSDVLPITNEPPCPQLDCAHTSSPLSTSKRTRRNRNVEARNRTRSSSETIHHIMTERKRRQDLTQKFIALSATIPGLKKMGEKYNLRLNDLLKYLRQDQLLKPLDVQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1739 215 PANTHER BHLH TRANSCRIPTION FACTOR 40 189 - -
Dere12g1739 215 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 195 IPR036638 GO:0046983
Dere12g1739 215 Gene3D - 141 208 IPR036638 GO:0046983
Dere12g1739 215 MobiDBLite consensus disorder prediction 123 138 - -
Dere12g1739 215 MobiDBLite consensus disorder prediction 139 155 - -
Dere12g1739 215 MobiDBLite consensus disorder prediction 123 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1739 Dere-ChrDere12 29986671 29990462 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1739 147 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 52.459 3.74e-11 59.7