Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1738 ATGGCGTCGTCCTTCGCCATTCACAGAATGGATCAGCTGTCTTGGGAGGCTTGGCTTTCTGATCTGGAAAGGGAGATTAATGGAGATTTCTTGAAAGTAGAGAACTCAGTGGATGACGAAGAATACAATTTCGGAGATATCCTACAGCAGCACTCAACTTTCTCTTCAGAAAGTGAAGCCAAATTATCCCAAACTGTGGCGTATGGTGGCGCCACCATCAGCAATTTAGCCAAGAGTGCTATATGCTCCAACTCCGTCGTTCACTGTGCTTCAGAGACCCAAACACCACCAACCACGTACATTCTCTCTTTCGATAACTCCACTGTACTACCAGCCATGTCCAAACCTGAAAGTGAATATTTAATCCATGGCAACAATATTAATGTTGCCTCCGAGCCCAAAAGCACAAGAGCTTCTTCGTTTCTGTCCACCAAACGAACCCTCGAAAACCTTAACTATGAAACACAGGTCAAGAGAGGAACAAAGAAGGCTAGAAGAAGCACTTCTGAGACAATGGATCACATTATGGCTGAGAGGAAAAGGAGACAGGAACTCACTGGAAGGTTCATCGCACTTTCGGCCACCATCCCTGGCCTGAAAAAGATTGACAAGGCCGTCATGCCATTTGGCTCCTCTACTCTTGATATTACCATTATTGCTCAGATGGGTGAGGAATACAGTATAACGATGAAGGATGTAGTGAAAAGCCTGAGAGCTCTCTTGGAGTGA 729 0.454 MASSFAIHRMDQLSWEAWLSDLEREINGDFLKVENSVDDEEYNFGDILQQHSTFSSESEAKLSQTVAYGGATISNLAKSAICSNSVVHCASETQTPPTTYILSFDNSTVLPAMSKPESEYLIHGNNINVASEPKSTRASSFLSTKRTLENLNYETQVKRGTKKARRSTSETMDHIMAERKRRQELTGRFIALSATIPGLKKIDKAVMPFGSSTLDITIIAQMGEEYSITMKDVVKSLRALLE 242
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1738 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 172 206 IPR036638 GO:0046983
Dere12g1738 242 PANTHER BHLH TRANSCRIPTION FACTOR 46 205 - -
Dere12g1738 242 Gene3D - 156 241 IPR036638 GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere12g1738 Dere-ChrDere12 29901009 29902992 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1738 97 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 40.179 4.77e-15 71.6