Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1732 ATGAACCCTCAGCATTATTCTTTTGACCTTAGCTTCGGACACAACAGAGACAGTTGCATTGGACTTGGTCTGAATCAGAATGAATTTGGCCCCTCTGCGAAGGTAGTGAAGCCCTCTTGCAGTTCCAATGCAGATTTCTACCTTCCGCCTCCAGAATATCAAAATTTAAGGGTTGTTATATCGATCACCATTCCGATCAGAAGCATTTGCTCAACATATGATCCAACGGTAGCAAATGGAGCTGCAAGTTTTACGAGCACATTTGTTTGTTTGGATAAGGCCTTTCTTTCAATAAACCTTTCTCAAACTAAAGCTTCCCTTTCAAGCTCTCTCTTCTTTCACTTTCTAATGGAGCAGCACCACTCATGGCAGAATTCCTTCTCTCTTGATGATTTGGAAATGGATGGTCAAGGTTTGAACTTTGATTTTGGTGAGGATGAGTTCTTCAATGACATCTTTCACCACCCAGAGGGTCTTCGTTCTCAAGCTGAATCAGATCATAACTCCTCCACCGTCACTGTCCTTGGATATGCTGACAGCGCTGCCGCCGCCGCCGACGTCTGCAACATATCCTTTAGTAATAGTGGCTTGGTTGACAGTGGCAGTAGCAGCAACTATTTGAATAGCTACATGAACAACACAAAGCAACATGTTTCGTCGTGCACTCTGTCATCTGATGAATCCACTGTCATGCCTATTGTGAACGAATCTCCATGCCCGCTGCTCGTATCTGCTCTCACCAACGCCCATTCTTCGCTGGTGTCGTCGTCAAAACGGACGCGGAGGAGTCGTAACGTTGAGGCAAGAAGCAGGACAAGATCTTCTGAAACCATCCATCACATTATGACCGAGAGGAAAAGGAGACAGGATCTGGCTGAGAAATTCATAGCACTTTCCGCAACCATACCCGGCTTGAAGAAGGTCACTCTATATACTCTATACACTGTCTCCTAA 954 0.4528 MNPQHYSFDLSFGHNRDSCIGLGLNQNEFGPSAKVVKPSCSSNADFYLPPPEYQNLRVVISITIPIRSICSTYDPTVANGAASFTSTFVCLDKAFLSINLSQTKASLSSSLFFHFLMEQHHSWQNSFSLDDLEMDGQGLNFDFGEDEFFNDIFHHPEGLRSQAESDHNSSTVTVLGYADSAAAAADVCNISFSNSGLVDSGSSSNYLNSYMNNTKQHVSSCTLSSDESTVMPIVNESPCPLLVSALTNAHSSLVSSSKRTRRSRNVEARSRTRSSETIHHIMTERKRRQDLAEKFIALSATIPGLKKVTLYTLYTVS 317
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1732 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 275 317 IPR011598 GO:0046983
Dere12g1732 317 MobiDBLite consensus disorder prediction 260 275 - -
Dere12g1732 317 PANTHER BHLH TRANSCRIPTION FACTOR 135 308 - -
Dere12g1732 317 MobiDBLite consensus disorder prediction 253 275 - -
Dere12g1732 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 273 306 IPR036638 GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere12g1732 Dere-ChrDere12 29763497 29765216 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1732 279 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 60.000 1.62e-07 50.1