Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1716 ATGGATAGTAATTATTCTTCGATACCCAAAAGTTCATATGTAGAATTGCAGCCTCAATATGATTACCCTAACCCTTTAAACTCCCCAAGAAGAACCTCTTTCGACGAAGCCGGTTATTTGAGATCTAAGGATGTTGAAGGTGAAGATATCGATGATGATTTTGAAACTGACATTGATAATTATCCGCTTGTTGTCGGTGGGTCTAATAACGGTTCTGGGGTACCTGGGGCTGTGTTCAATCTGACCACGACCATTATTGGGGCAGGGATTATGGCCCTCCCTGCCACAATGAAAGTTCTTGGAGTGGTTTTGGGGACTGTGTTGATTATTTTGATGGGGATTCTGTCAGAAATTAGTGTTGAATTGTTACTACGGTTTTCAGTTTTATGCAAAGCATCGTCTTATGGGGAGGTTGTTCAACATGCCATGGGAAGACCAGCGAGGATTTTGTCCGAGATCTGTATTATAGTGAACAATGCTGGTGTTTTGGTGGTTTATCTGATAATCATGGGGGATGTTATGTCTGGTTCTGTTCGTCATTTGGGGGTTTTTGATCAATTAATCGGAAATGGGGTGTGGGACCAGAGGAAGCTTGTGATTTTGGTTGTCGTGGTGATCTTTCTTGCACCACTTTGTTCTTTGGATAAGATTGATTCATTGAGCTTGACTTCAGCTGCTTCTGTGGCTCTTGCCATTGTGTTTGTTGTGGTCGCTTTTGTTGTAGCTTTTATTAAGCTTGTTGAGGGGCGAATTGACGCTCCAAGGATGAGTCCTGATTTTAGCTCAAAACAGGCCATATTGGATTTGCTTGTGGTGATCCCAATCATGACAAATGCATACATTTGCCATTTTAATATACAGCCAATATACAACGAACTTAAAGGGCGGTCTCCTCAGAAGATGAATCGGGTAGGAAGGATCACAACCATATTATGCGTCTTGGTATATGCTTCAACAGCACTCTCAGGTTATCTACTATTCGGGAAGGATACGGAGTCTGATGTGCTGATTAATTTTGACAAGGATCTCGGAATTCGTTTTAGCTCAGCCTTGAACTATATCGTTCGGATAGGCTACATTCTCCATTTGGTACTTGTTTTCCCAGTTATCCATTTCTCCCTACGGCAAACGGTGGATTCCTTGGTGTTTGAGGGATCACCTCCTCTTTCAGAGAGTAGGAAGAGATCTCTGGGGTTGACAGTGATCCTGTTGTTCCTCATATATATTGGGTCTACCATGGTTCCAAACATTTGGACTGCCTTTAAGTTCACTGGGGCAACAACAGCAGTTTCACTTGGATTTATTTTTCCATCTATTATTGCCTTAAGATTAAGTCATCAAGGCGGCTTAAGCCTTTCTGAATGGTGTTTGTCATGGTTAATGTTGATACTGGCAGGGATCGTTAGTATAGTTGGAGTCATTGGCAATGTTTATAGCATCAAGAGTAAATCTCAGTGA 1458 0.4191 MDSNYSSIPKSSYVELQPQYDYPNPLNSPRRTSFDEAGYLRSKDVEGEDIDDDFETDIDNYPLVVGGSNNGSGVPGAVFNLTTTIIGAGIMALPATMKVLGVVLGTVLIILMGILSEISVELLLRFSVLCKASSYGEVVQHAMGRPARILSEICIIVNNAGVLVVYLIIMGDVMSGSVRHLGVFDQLIGNGVWDQRKLVILVVVVIFLAPLCSLDKIDSLSLTSAASVALAIVFVVVAFVVAFIKLVEGRIDAPRMSPDFSSKQAILDLLVVIPIMTNAYICHFNIQPIYNELKGRSPQKMNRVGRITTILCVLVYASTALSGYLLFGKDTESDVLINFDKDLGIRFSSALNYIVRIGYILHLVLVFPVIHFSLRQTVDSLVFEGSPPLSESRKRSLGLTVILLFLIYIGSTMVPNIWTAFKFTGATTAVSLGFIFPSIIALRLSHQGGLSLSEWCLSWLMLILAGIVSIVGVIGNVYSIKSKSQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1716 485 Pfam Transmembrane amino acid transporter protein 72 475 IPR013057 -
Dere12g1716 485 PANTHER AMINO ACID TRANSPORTER 71 468 - -
Dere12g1716 485 MobiDBLite consensus disorder prediction 1 31 - -
Dere12g1716 485 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1716 Dere-ChrDere12 29541692 29543149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1716 1 485 Amino Acid or Auxin Permease AAAP Family AT1G80510 74.545 0.0 679