Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1695 ATGGAAGATGCCTCTCCTTGCCATGAACAAGTGCCTGATGGTGAATGCATTGAGGATAAAAAAGAAGAAGGTGGTGAAATAACTGAAGCAGAGTGCCAAAATGGGTTTCCTGAAGGAAGAAGGGAGTTTGTTGCACCTGCTGTTGGGATGGAGTTTGAGTCCTATGATGACGCCTACAATTATTATATTTGCTATGCCAAGGAGGTGGGATTTCGTGTAAGGGTGAAGAACTCATGGTTCAAGCGAAATAGCAGAGAAAAGTATGGTGCAGTCCTATGCTGTAGCAGCCAGGGCTTCAAAAGAATAAAAGATGTTAACCATTTGAGAAAGGAAACAAGAACTGGTTGTCCTGCGATGATAAGGATGAGGTTGGTGGACTCTCAGAGATGGAGGGTACTTGAGGTTACGCTTGAACATAACCACCTCTTAGGTGCTAAGATATATAGATCAATTAAAAAGATGGGAGTTGGAGCCAAAAGGAAGTCACTATCTAGTTCTGATGCTGAAGTGCGAACAATTAAGTTATACCGTGCACTTGTGATAGATGCAGGAGGTAATGTTAATTCAAACTCCAGTACTAGAGAATTCAGAACTTGTTTTGGTTTTTCGAGTAAGTTGAATCTTAAAAAAGGTGACACACAGGCCATTTATAACTATTTTTGCCGCATGCAACTGACCAATTCAAATTTCTTTTACTTGATGGATTTCAATGACGAAGGGCATTTGAGGAATGTATTCTGGGCTGATGCTAGGTCTAGGGCTGCATGTGGTTATTTTGGAGATGTTATTTATTTTGACAACACATATTTGTCAAACAAATATGAAATTCCTCTTGTGGCATTTGTTGGAATTAATCAACATGGTCAATCAGTGTTGTTGGGTTGTGGCTTACTTGCTGGCGAAACATTAGAATCTTATAGATGGTTGTTCAGAACATGGGTTAAATGTATGTCAGGGTGTTTTCCCCAAACTATTATCACCGATAGGTGCAAGGTGTTGCAGACTGCAATTGCAGAAGCTTTTCCTAGAACTCGTCATTGTTTTGGCTTGTCATTAATCATGAAAAAAGTACCAGAGAAGTTAGGAGGGTTGCGCAATTATGATGCAATCAGGAAATCACTGAATAAAGCTGTTTATGAGTCATTGAAAGTGATTGAATTTGAAGCAGCATGGGGATTTATGATTCAGCATTTTGGAGTTTGTGATCATGAGTGGCTTCGTTCTATCTATGAAGACAGATTTCATTGGGCACCGGTGTTCTTGAAGGACATATTTTTTGCTGGAATGTCTGCAGCAAGTCCTGGTGAGACCTTGAGTCCATTTTTTGATAAATACGTGCACAAACAGACTCCTCTGAAAGAGTTTCTTGACAAATATGAATTAGCTCTCCAAAAGAAACACAAGGAAGAATCTGCTGCTGATATTGACTCAAGAAGCTCGAGTCCCTTGCTGAAAACAAGATGTTCTTTTGAATTGCAGCTCTCTAGAATTTACACAAGAGAAATATTCATGAAGTTCCAATATGAAGTGGAAGAAATGTATTCTTGTTTTAGTACCACACAATTACATGTGGATGGCCCGATTATAATTTTCTTGGTCAAGGAGCGCATTTTAAGTGATGGAAATAGAAGGGAGATCAAGGATTTTGAAGTATTGTACAACAGGACAGCTGGTGAAGTTCGCTGCATATGTAGTTGCTTTAACTTCAATGGATATTTATGTAGGCATGCACTGTGTGTGCTCAATTTTAATGGGGTGGAGGAGATCCCTTCCAAATACGTTCTTTCGCGATGGAAAAAAGATTACAAGCGTGTACATGTTCCTGATCTCAACTCAGGTATTGTCGATGAGACTGATCGTATTCAATGGTTTAATCAGTTATTTAGAAGTGCCTTGCAAGTTGTGGAGGAAGGGACAATTTCTCTAGACCACTATAATGTAGCTTTGCATGCTTTTCAGGAATCGTTGAGTAGGGTCCATGATGTAGAACACAGACAGGAGTAA 2004 0.3957 MEDASPCHEQVPDGECIEDKKEEGGEITEAECQNGFPEGRREFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRKETRTGCPAMIRMRLVDSQRWRVLEVTLEHNHLLGAKIYRSIKKMGVGAKRKSLSSSDAEVRTIKLYRALVIDAGGNVNSNSSTREFRTCFGFSSKLNLKKGDTQAIYNYFCRMQLTNSNFFYLMDFNDEGHLRNVFWADARSRAACGYFGDVIYFDNTYLSNKYEIPLVAFVGINQHGQSVLLGCGLLAGETLESYRWLFRTWVKCMSGCFPQTIITDRCKVLQTAIAEAFPRTRHCFGLSLIMKKVPEKLGGLRNYDAIRKSLNKAVYESLKVIEFEAAWGFMIQHFGVCDHEWLRSIYEDRFHWAPVFLKDIFFAGMSAASPGETLSPFFDKYVHKQTPLKEFLDKYELALQKKHKEESAADIDSRSSSPLLKTRCSFELQLSRIYTREIFMKFQYEVEEMYSCFSTTQLHVDGPIIIFLVKERILSDGNRREIKDFEVLYNRTAGEVRCICSCFNFNGYLCRHALCVLNFNGVEEIPSKYVLSRWKKDYKRVHVPDLNSGIVDETDRIQWFNQLFRSALQVVEEGTISLDHYNVALHAFQESLSRVHDVEHRQE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1695 667 Pfam MULE transposase domain 262 356 IPR018289 -
Dere12g1695 667 Pfam SWIM zinc finger 559 581 IPR007527 GO:0008270
Dere12g1695 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 661 IPR031052 GO:0006355
Dere12g1695 667 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Dere12g1695 667 SMART 26again6 560 587 IPR006564 GO:0008270
Dere12g1695 667 Pfam FAR1 DNA-binding domain 60 143 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1695 Dere-ChrDere12 29380504 29382507 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere12g1695 MULE 4.1e-27 CL0219