Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1659 ATGCTTAGGTTTTCTTCTGTCTGCTTGCTTTTGTCTCATTACCACCTTTTTCAGCACTACATCAAATTGGGAGAGGTAGAGAAGAACTGTAAGTTGAATGATCTTCTTGATGCCCTAGATTTCAACCATGTGATCATTTTTGTCAGAAGTGTCAACAGAGCAGCAGAGTTGAACAAGTTGCTTGTGGAGTGCAACTTCACATCAATCTGCATACATTCAGGGATGTCACAGGAAGAAAGGTGCATGCAGATTGTTTCTCTTACTTGTTCTTCTGCAGATATGGACCTAAAACAAATGGAATTTAGTGAACGCGCTCTCAATTCTCATAGTTCTGGATGGGATCCAAATGTGAGAAGGGATGGTAGGTTTGGCACCAAGGGTCTTGCAATCACTTTTGTGTCTTCTTCCTCTAATTATGATGTTCTTAATTAG 432 0.4028 MLRFSSVCLLLSHYHLFQHYIKLGEVEKNCKLNDLLDALDFNHVIIFVRSVNRAAELNKLLVECNFTSICIHSGMSQEERCMQIVSLTCSSADMDLKQMEFSERALNSHSSGWDPNVRRDGRFGTKGLAITFVSSSSNYDVLN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1659 143 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 15 138 - -
Dere12g1659 143 Gene3D - 14 112 IPR027417 -
Dere12g1659 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1659 Dere-ChrDere12 29114165 29115409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1659 11 143 Eukaryotic Initiation Factors Gene Family AT5G11170 54.483 1.77e-43 144