Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1635 ATGGAGAACTTGAAGGCACCTTTGAAGGGTGTAGTTAACGATATTCGAGGAAGAGCAAAGTGTTACAAGGAGGATTGGATTTCTGGTCTCTGTTCAGGAATTGGGATATTGGCGCCAACTACCTATATTTTCTTCGCTTCTGCTCTTCCTGTCATTGCCTTTGGGGAACAGCTCAGTAGAGACACAGAGGGAAGCTTGAGCTCAGTAGAAACATTGGCTTCAACTGCTATCTGTGGAATCATACACTCAATTCTCGGAGGCCAACCTCTGTTAATTCTAGGAGTTGCAGAACCCACTATCATTATGTATACATACTTGTACAATTTTGCCAAAGATAGGGATGGTTTGGGACGAGAACTCTTTCTGGCTTGGGCTGGTTGGGTTTGCGTTTGGTCAGCTCTCTTCTTGTTTCTTCTAGCAATATTCAATGTTGCTGCCATTGTCAATAGATTCACCAGAATTGCTGGGGAGCTTTTCGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCCATCAAGGGAGTGGTTAGTGAGTTTAAGGTTCCTAAAGACGAAGACCCTGCATCAGAGAAGTACAAATTTCAGTGGCTTTACGCGAATGGATTATTGGGAATTATATTCAGCTTTGGCCTTCTCTACTCTGCTCTTAGGATCAGAAAGGCTAGATCATGGTTATATGGCACAGGGAAGTTGAGAAGTTTTCTTGCAGACTATGGGGTTCCATTAATGGTAATTGTGTGGACAGCTATGTCCTTCACAGTACCAAGTAAACTTCCCTCTGGAGTTCCCAGAAGGCTATTTGCACCTCTTGCTTGGGAATCTACTTCTTTACACCATTGGACAGTCGTTAAAGACATGGTTAAGGTCCCACCTGCATATATATTTTCAGCTATTATTCCTGCATTGATGATAGCTGGGCTTTACTTCTTCGACCATAGTGTTGCATCTCAATTGGCACAACAGAAGGAGTTCAATCTCAAGAAACCTTCTGCTTATCATTATGACGTGTTGTTGCTTGGATTCATGACTTTGCTTTGTGGGTTAATTGGTTTGCCACCTTCCAATGGAGTTCTTCCCCAATCCCCCATGCACACCAGGAGCCTTGCTGTTCTCAAGAAACAGTTGATTCGAAGAAAGATGATGGAAAGTGCCAAGGAAAGCATAAGACGCAAAGCAAGCAACTCCGAGATCTATGGAAACATGCAAGCAGTGTTCATAGAAATGGACAGCCCAAATAATTCTTCAGTGGCGAAAGAACTAGAGGATCTGAAGGAGGCAGTCCTGAAAGGGGAAGAGGAAGACAAAAAGAACACGTTTGACCCTGAGAAGCACATTGATGCTCATCTGCCTGTGAGAGTGAACGAACAGAGAGTGAGCAATCTCTTGCAAGCAACACTTGTTGGGGCTTCAGTGTTCGCCATGCCTCTCATAAAGAGGATACCGACTTCGGTTCTGTGGGGTTACTTTGCCTTCATGGCCATTGATAGTCTTCCTGGAAATCAATTCTGGGAAAGGCTGCTACTTCTCTTCGTTGCCCCTAATAGGCGATTCAAGGTATTGGAAGGGGACCATGCTTCCTTTGTTGAGACAGTACCAATGAGAGGCATATTATTCTTCACACTGTTCCAATGTGTATATTTCTTGGTATGTTTTGGAGTAACATGGATCCCCATAGCTGGAATCTTGTTCCCCTTGCCCTTCTTCCTGCTCATCGCAGTAAGACAGTATGTCCTTCCCAAGTTCTTCGATGCTCTTCATTTAAGGGAACTCGATGCAGCTGAATATGAAGAAATTGCTGGTGCTCCAAGGCTTTCCTTCAATCTCTCATTCAGGGAGATGGAATCGCCTGGTGGGGGGTCGAGGGAAAGGGGTGATGCTGAGATATTGGACGAGTTAACGACTAGTAGAGGGGAGTTGAAGGTCAGAACTGTCAGCTTCAATGAGGAAAGACATGGACAGGCATTTCTTGTGTATCCTGAAGGAATTGAGAGAGAAACGGATTCGTAG 2007 0.4449 MENLKAPLKGVVNDIRGRAKCYKEDWISGLCSGIGILAPTTYIFFASALPVIAFGEQLSRDTEGSLSSVETLASTAICGIIHSILGGQPLLILGVAEPTIIMYTYLYNFAKDRDGLGRELFLAWAGWVCVWSALFLFLLAIFNVAAIVNRFTRIAGELFGMLITVLFIQEAIKGVVSEFKVPKDEDPASEKYKFQWLYANGLLGIIFSFGLLYSALRIRKARSWLYGTGKLRSFLADYGVPLMVIVWTAMSFTVPSKLPSGVPRRLFAPLAWESTSLHHWTVVKDMVKVPPAYIFSAIIPALMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDVLLLGFMTLLCGLIGLPPSNGVLPQSPMHTRSLAVLKKQLIRRKMMESAKESIRRKASNSEIYGNMQAVFIEMDSPNNSSVAKELEDLKEAVLKGEEEDKKNTFDPEKHIDAHLPVRVNEQRVSNLLQATLVGASVFAMPLIKRIPTSVLWGYFAFMAIDSLPGNQFWERLLLLFVAPNRRFKVLEGDHASFVETVPMRGILFFTLFQCVYFLVCFGVTWIPIAGILFPLPFFLLIAVRQYVLPKFFDALHLRELDAAEYEEIAGAPRLSFNLSFREMESPGGGSRERGDAEILDELTTSRGELKVRTVSFNEERHGQAFLVYPEGIERETDS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1635 668 FunFam probable boron transporter 2 18 60 - -
Dere12g1635 668 Pfam HCO3- transporter family 199 374 IPR011531 GO:0006820|GO:0016020
Dere12g1635 668 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016020
Dere12g1635 668 Pfam HCO3- transporter family 451 541 IPR011531 GO:0006820|GO:0016020
Dere12g1635 668 PANTHER ANION EXCHANGE PROTEIN 5 599 IPR003020 GO:0005452|GO:0006820|GO:0016020
Dere12g1635 668 Gene3D Helical hairpin bin 18 60 - -
Dere12g1635 668 Coils Coil 413 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1635 Dere-ChrDere12 28840518 28843872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1635 1 667 Antiporters AT1G74810 69.481 0.0 978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0592 04 5911218 5914226 Dere12g1635 12 28840518 28843872 ECH
Dere12g1635 12 28840518 28843872 Dere12g1635 12 28840518 28843872 ECH