Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1601 ATGGGTGTGAACTCCAACCGAGTCGATCACTTCGATTCTCATCATCCTACTGTCCTCAGAATCCAAACCCAGATTCCTCTTCCTTCCATGGAAATCCACACTGTTCGCCTCCCTCCCGAGAGAACCACCCTTCAGAAGCTCAAGCACAGGCTCTCTGAGATCTTCTTCCCCGATGACCCTCTTCACAGGTTCAAGAACCAAACTTGGTTCATGAAACTCCTTCTGGCTCTTCAGTATCTCTTCCCCATTTTCCAGTGGGCCCCACAGTATAGCCTCAACCTTCTCCGTTCTGATACCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCACAGGGAATAAGCTATGCAAAGCTTGCAAATTTGCCACCTATAGTGGGACTATATTCCAGTTTTGTGCCTCCATTGATATACTCCCTGCTTGGGAGTTCTAGACACCTGGGTGTTGGGCCTGTCTCCATTGCTTCTCTAGTTATGGGGTCAATGTTAAGCGAGACAGTCTCTTTTACTTCAGATCCAATTCTTTATCTTAAACTCGCTTTCACTGCCACCTTCTTCGCTGGTTTATTCCAATCTTCTCTGGGTATTTTCAGGTTAGGGTTTGTGATTGATTTTCTATCAAAGGCAACACTGGTGGGCTTCATGGCAGGGGCAGCGATTATAGTGTCGCTGCAACAACTTAAAGGATTACTTGGAATAGTGCACTTCACCAACAAGATGCAGATGATTCCTGTTTTGACCTCTGTTTTTGAGCATAGACATGAGTGGTCATGGCAAACAATTGTACTGGGATTCGCCTTCTTGGCCTTCCTTCTCATTACAAGGCACATTAGCTTGAAGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCTCCACTGACATCAGTTATTCTGTCAACAATTGTAGTCTTTCTTCTCAGAGACAAGGCTCATGGAATTGCAATTATCGGACACTTACCAAAGGGCCTTAATCCACCATCAGCAAATATGTTATACTTCAATGGCCCTTATTTGGCCCTTGCTATCAAAACTGGCATTGTGACTGGGATCTTATCTCTTACTGAAGGAATTGCAGTGGGAAGAACATTTGCTGCACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTCATGAACATAGCAGGCTGCTGTTCTTCATGTTATGTCACAACAGGATCTTTTTCTCGGTCTGCTGTAAACTACAATGCTGGAGCACAGACAGCAGTTTCAAACATAATAATGGCTTCAGCTGTTCTTGTGACCCTTCTATTTCTCATGCCTCTGTTCTATTACACACCAAATGTTGTTTTGGCAGCCATTATCATCACTGCTGTGATAGGACTGATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGATTTCTTGGCTTGTCTGTGCTCCTTCTTCGGTGTTCTGTTCATCTCAGTGCCTCTAGGCCTTGGCATAGCAGTTGCAATTTCAGTCTTCAAGATTCTGCTTCATGTATCTCGGCCAAACACTGTGGTCTTGGGGAACTTACCAGGAACACAAATATTTCACAACCTAAACCGATATAGAGAAGCTTTAAGCGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACTTACTTGCAAGAAAGGATATTGAGATGGGTTCGAGAAGAGGAAGAGCGTATAAAAGCAAACAATGAAAGTACATTGAAGTGCATAATTCTAGACATGACAGCTGTGACAGCCATAGACACAAGTGGAATTGACGCTTTATGTGAACTAAGAAAAATTTTGGAGAAAAGATCATATCAGCTTGTGTTGACAAATCCTGTTGGGAATGTGATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGGACTCTATCTCACAGTAGGAGAAGCTGTGGCTGACATTTCATTGTCCTGGAAAGCTTAG 1968 0.4324 MGVNSNRVDHFDSHHPTVLRIQTQIPLPSMEIHTVRLPPERTTLQKLKHRLSEIFFPDDPLHRFKNQTWFMKLLLALQYLFPIFQWAPQYSLNLLRSDTISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSFTSDPILYLKLAFTATFFAGLFQSSLGIFRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQMIPVLTSVFEHRHEWSWQTIVLGFAFLAFLLITRHISLKKPKLFWVSAAAPLTSVILSTIVVFLLRDKAHGIAIIGHLPKGLNPPSANMLYFNGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGCCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTVVLGNLPGTQIFHNLNRYREALSVPSFLILAVESPIYFANSTYLQERILRWVREEEERIKANNESTLKCIILDMTAVTAIDTSGIDALCELRKILEKRSYQLVLTNPVGNVMEKLHQSNILDSFGLKGLYLTVGEAVADISLSWKA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1601 655 ProSiteProfiles STAS domain profile. 526 649 IPR002645 -
Dere12g1601 655 Gene3D STAS domain 506 650 IPR036513 -
Dere12g1601 655 CDD STAS_SulP_like_sulfate_transporter 527 642 - -
Dere12g1601 655 FunFam Sulfate transporter 31 506 652 - -
Dere12g1601 655 Pfam Sulfate permease family 95 474 IPR011547 GO:0016020
Dere12g1601 655 Pfam STAS domain 528 645 IPR002645 -
Dere12g1601 655 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Dere12g1601 655 SUPERFAMILY SpoIIaa-like 532 647 IPR036513 -
Dere12g1601 655 PANTHER SULFATE TRANSPORTER 44 648 IPR001902 GO:0016020|GO:0055085
Dere12g1601 655 NCBIfam sulfate permease 82 645 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1601 Dere-ChrDere12 28483745 28490390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1601 1 655 Inorganic Solute Cotransporters AT3G15990 76.031 0.0 1036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1601 12 28483745 28490390 Dere12g1601 12 28483745 28490390 ECH