Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1593 ATGAGCGTGGTTGGCTTTGATTTTGGGAACGAGAGCTGCATTGTTGCTGTTGCAAGGCAGAGGGGGATTGATGTTGTACTCAACGATGAGTCCAAGCGAGAAACACCTGCAGTTGTGTGCTTCGGTGACAAACAAAGGTTCATCGGGACAGCTGGGGCTGCATCCACTATGATGAACCCCAAGAATTCAATCTCTCAGATAAAGCGACTAATTGGTAGACAATTTTCTGACCCAGAATTGCAGCGGGATCTGAAGTCATTGCCTTATGCTGTCACTGAAGGGCCTGATGGATTTCCATTAATTCATGCACGGTATTTGGGTGAAGTTAGAACATTTACACCTACTCAAGTCTTGGGAATGGTGTTGTCAGATCTCAAGGGCATAGCTGAAAAGAATCTGAATGCAGCTGTTGTTGATTGTTGCATTGGAATTCCAGTCTATTTTACTGATCTTCAGAGAAGGGCAGTCTTAGATGCAGCCAAGATTGCTGGTTTACACCCTCTTCGCCTGATTCATGAAACAACTGCTACTGCCTTGGCTTATGGAATTTATAAAACAGATCTTCCTGAAAATGATCAACTGAATGTTGCCTTTGTTGACATTGGACACGCTAGCATGCAAGTATGCATTGCTGGCTTTAAAAAGGGGCAGCTGAAAGTATTGGCCCATTCATTTGATAGGTCTCTTGGTGGTAGAGATTTTGATGAGGTTTTGTTCAATCATTTCGCTGCAAAATTTAAGGAGGAGTACAAGATTGATGTGTTTCAGAATGCCAGGGCTTGTCTAAGGCTCAGGGCTGCATGTGAGAAGCTGAAGAAGGTTCTCAGTGCTAATCCTGAGGCACCTCTGAACATTGAGTGCTTAATGGATGAGAAGGATGTCAGGGGATACATAAAGCGTGAGGATTTTGAGCAACTAAGTGTTCCAATTTTGGACCGTGTGAAGAGACCTTTGGAGAAGGCATTAGCTGAAGCAAACCTTACAATTGAGAATATCCATATGGTTGAAGTGGTTGGCTCAGGTTCTCGTGTGCCAGCTATAAACAAAATATTGACAGAATTTTTCAATAAGGAGCCTAGGCGCACAATGAATGCAAGTGAGTGTGTTGCTAAGGGTTGTGCCTTGCAATGTGCAATTCTTAGTCCAACGTTTAAAGTAAGAGAGTTTCAGGTCAATGAAAGCTTTCCCTTCTCAATTTTACTGTCATGGAAAGGTTCTGGTCCAGATGCACAAGAAAGTGGACCAGATAATCAGCTAAGTACTATTGTTTTTCCCAAAGGAAATCCCATACCGAGTGTCAAGGCCCTGACATTCTATAGGTCAGGAACATTTTCTGTTGATGTACAGTATGCTGATATGGGTGAGCTGCAAGCACCTGCAAAGATTAGCACATATACTATTGGTCCATTCCAAACTACTAAAAGTGAAAGGGCAAAAGTTAAAGTGAAAGCTCGTCTGAATCTGCATGGAATTGTATGCATTGAGTCAGCAACTCTTTTGGAGGAGGAAAATGTTGAGGTTCCAGTATCCAAAGAACCATCTGGAGAAAATGCTCAAATGGACACTGATGAGGCTCCTACTGATGCTACTGCACCACCACCAAGCTCTAATGATACTGACGTCAATATGCAAGATGCTAAGGCAACTGCTGATGCCCCTGGGGTTGAAAATGGCATCCCTGAGCCAGTAGACAAGCCTGTGCAGATGGATACTGATACCAAGCCTGAGGCTCCTAAGAAAAAGGTCAAGAAGACAAATATACCTTTATCAGAGCTGGTTTATGGAGCTATGGCACCTGTAGATCTCCAGAAAGCAGTTGAGAAGGAGTTTGAAATGGCTTTACAAGATCGTGTGATGGAGGAAACCAAAGACAAGAAAAATGCGGTTGAGGCATATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAGGAGTTTGTCACTGCTTCAGAGAGAGAGGAGTTTAGCGCTAAACTTCAGGAGGTGGAAGACTGGTTATACGAGGACGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAACTTGAGGAACTCAAGAAGCAAGGTGATCCAATTGAAGAGCGTTACAAGGAATATATGGAGAGGGGTACAGTAATTGATCAACTCATATATTGCATAAATAGTTACAGAGAAGCTGCTATGTCAAATGATCCCAAATTTGACCATATTGACATCTCCGAGAAGCAGAAGGTATTAAATCAATGTGTGGAAGCTGAGGCTTGGCTTAGGGAGAAGAAGCAGCAGCAGGACTCACTTCCGAAATATGCCAATCCTGTACTCTTATCAGCTGACATAAGGAAGAAAGCTGAGGCAGTTGATAGGTTCTGTAAGCCGATCATGACAAAACCAAGGCCAGCCAAGCCAGCTACTGAAGCTCCTGCAACCCCACCTCCTCAGGGTGGTGAGCAGCAGCAACAACCTCAGGGGGATGCCAACAATAATGCTAATGCTAGCCCTGATGAGAATGCAGGGGACAGTGCTAGTCAGGTTCCACCAACATCTACCGAACCAATGGAGACTGACAAGTCAGAGAACACAAGCTCTGCGTAA 2574 0.4371 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKSLPYAVTEGPDGFPLIHARYLGEVRTFTPTQVLGMVLSDLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLDAAKIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGYIKREDFEQLSVPILDRVKRPLEKALAEANLTIENIHMVEVVGSGSRVPAINKILTEFFNKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFSILLSWKGSGPDAQESGPDNQLSTIVFPKGNPIPSVKALTFYRSGTFSVDVQYADMGELQAPAKISTYTIGPFQTTKSERAKVKVKARLNLHGIVCIESATLLEEENVEVPVSKEPSGENAQMDTDEAPTDATAPPPSSNDTDVNMQDAKATADAPGVENGIPEPVDKPVQMDTDTKPEAPKKKVKKTNIPLSELVYGAMAPVDLQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTASEREEFSAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYMERGTVIDQLIYCINSYREAAMSNDPKFDHIDISEKQKVLNQCVEAEAWLREKKQQQDSLPKYANPVLLSADIRKKAEAVDRFCKPIMTKPRPAKPATEAPATPPPQGGEQQQQPQGDANNNANASPDENAGDSASQVPPTSTEPMETDKSENTSSA 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1593 857 Gene3D Actin; Chain A, domain 4 230 313 - -
Dere12g1593 857 FunFam Heat shock 70 kDa protein 4 1 76 - -
Dere12g1593 857 MobiDBLite consensus disorder prediction 567 583 - -
Dere12g1593 857 FunFam Heat shock 70 kDa protein 4 111 206 - -
Dere12g1593 857 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 712 795 IPR029048 -
Dere12g1593 857 MobiDBLite consensus disorder prediction 520 544 - -
Dere12g1593 857 MobiDBLite consensus disorder prediction 503 583 - -
Dere12g1593 857 PRINTS 70kDa heat shock protein signature 2 15 - -
Dere12g1593 857 PRINTS 70kDa heat shock protein signature 363 383 - -
Dere12g1593 857 PRINTS 70kDa heat shock protein signature 332 348 - -
Dere12g1593 857 PRINTS 70kDa heat shock protein signature 30 42 - -
Dere12g1593 857 PRINTS 70kDa heat shock protein signature 140 160 - -
Dere12g1593 857 Gene3D - 186 360 - -
Dere12g1593 857 FunFam Heat shock 70 kDa protein 4 38 113 - -
Dere12g1593 857 MobiDBLite consensus disorder prediction 805 857 - -
Dere12g1593 857 CDD HSPA4_like_NDB 2 381 - -
Dere12g1593 857 FunFam Heat shock 70 kDa protein 4 597 707 - -
Dere12g1593 857 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 697 IPR029048 -
Dere12g1593 857 Coils Coil 683 703 - -
Dere12g1593 857 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Dere12g1593 857 FunFam Heat shock 70 kDa protein 14 387 595 - -
Dere12g1593 857 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Dere12g1593 857 Gene3D - 38 113 - -
Dere12g1593 857 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Dere12g1593 857 FunFam Heat shock 70 kDa protein 4 230 313 - -
Dere12g1593 857 Gene3D - 598 706 IPR029048 -
Dere12g1593 857 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Dere12g1593 857 Gene3D - 5 374 - -
Dere12g1593 857 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Dere12g1593 857 PANTHER HSC70CB, ISOFORM G-RELATED 1 848 - -
Dere12g1593 857 MobiDBLite consensus disorder prediction 784 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1593 Dere-ChrDere12 28446689 28450937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1593 4 438 Calmodulin-binding Proteins AT1G16030 35.616 9.41e-87 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1593 12 28446689 28450937 Dere12g1593 12 28446689 28450937 ECH