Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1577 ATGAAGATCTACAGGTGTAATAATGCAAATGGCAAGCTATCTCTTATCATGCTAACTGAAGAAGATCTACCATTGTATTGCGGTAAGAAGAAATTCTTTAAGTTCAGTTTTAGATCAGTCTACGCTTGCAAACCAATTGTTCATGATCATCGCAGAAAATGTGAGACAATGGCAGTACCACCAACCATGATGAAGCAAGTCATTTTACTATTCTTTGTGATTCTTGTCTTGTCATGTGTTTTCCTTCTTGCACTATGTTGCCTAGACGACGCAGTCCAAGCTATGGCGATATCTTTAAAGATGATTGGCATAATTTCAGCACAGCAACATATATCACCTACCAACTGCTTGTCGATTTGCCTGTGTGAGTATTACTCCATGGGAAAAACCTTCTCATTGGTTAGCAGAGGACTGCTGAAGCGTGGATGGATGTTATCGAAGGTTATCGAAGGGAAGACGATGATTTCAAAGATTGCCAACCTAAACGCGCCACTTGATTTTGGCTCTCGTCCAAGGCTTACCATTGATGATTATGGTAACATGAAAATCTTGTTCAACGGAGATTTGAACTCTATACCCATATACTCTTGTGAAGCATCATCAAACAATCAGAAAATCAATGCTAGTGCGGGCATATCTGGAACGTGGGCAGGACCAAACATGCCTGCTTCAGGTTCCTTCACTCTTGCCATGGATATGAACACCCAGCAGCGATGTGAAGCAATTGGTCGTGTGGTGGTGAGGGTACGTGTTCTGGACTAGACAGCCCCCGTGTCGTGCAATGAAGACCACCGTGAATTAAATAGTGGTTGCATGCATCCGCCCCCTCCACCTTGCAGGCACACAAATGCTTATGTGTCCTTGCTCGAGTATCAAATTAGTCATATGTCCAATGAAGGGTACAAGATTGAGGGAACTAAGAATGTCCCTCTCTATGATTGTGGCCTCAGATGTTTGATGAATTGCTCCTGTGTTGCCTATTCTTCCACAACCAATGACGATACTAGCTGCCAGATATGGGACAACAGGGCCAACTTTGTGGCATCTCCTGATAGGTGGCCAGTTTACTTCATTCGTGATAAAAGGCAATCCCCAAATTACGACAGTACGAAATACCAAGACTTGGATTTCTACCTTTTTGATTCCAACAACGGGACTTTGTTAGATTGGAAGAAGCGGTTCAATATTATTCATGGTATAGCTCAAGGACTTGTTTATTTTCATAAATTTTCAAGATTAACAGTGATTCACCGAGACTTGAAGCCAAATAATATTTTACTTGATCATGAGATGAATAAAAAAATCTCTGATTTTGGAATGGCAAGAATATTTGGATTAAAGGATTCAGAGCAAAATGCAAGTAGGCTGGTCGGAACTTAATTTGGAGTACCACATGAGATTCCTAGTGTCAAGAACAATGCTTCTTGTTTTAACTATGATGATTCCCTCAAGCTCACAGGATATGTATGTGTTGTGTAA 1479 0.4111 MKIYRCNNANGKLSLIMLTEEDLPLYCGKKKFFKFSFRSVYACKPIVHDHRRKCETMAVPPTMMKQVILLFFVILVLSCVFLLALCCLDDAVQAMAISLKMIGIISAQQHISPTNCLSICLCEYYSMGKTFSLVSRGLLKRGWMLSKVIEGKTMISKIANLNAPLDFGSRPRLTIDDYGNMKILFNGDLNSIPIYSCEASSNNQKINASAGISGTWAGPNMPASGSFTLAMDMNTQQRCEAIGRVVVRVRVLDXTAPVSCNEDHRELNSGCMHPPPPPCRHTNAYVSLLEYQISHMSNEGYKIEGTKNVPLYDCGLRCLMNCSCVAYSSTTNDDTSCQIWDNRANFVASPDRWPVYFIRDKRQSPNYDSTKYQDLDFYLFDSNNGTLLDWKKRFNIIHGIAQGLVYFHKFSRLTVIHRDLKPNNILLDHEMNKKISDFGMARIFGLKDSEQNASRLVGTXFGVPHEIPSVKNNASCFNYDDSLKLTGYVCVV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1577 492 SUPERFAMILY Protein kinase-like (PK-like) 370 461 IPR011009 -
Dere12g1577 492 Pfam PAN-like domain 307 342 IPR003609 -
Dere12g1577 492 Gene3D Transferase(Phosphotransferase) domain 1 366 475 - -
Dere12g1577 492 ProSiteProfiles Protein kinase domain profile. 216 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1577 492 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 370 460 - -
Dere12g1577 492 Pfam Protein kinase domain 389 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g1577 492 ProSiteProfiles PAN/Apple domain profile. 279 361 IPR003609 -
Dere12g1577 492 FunFam Os07g0541700 protein 371 459 - -
Dere12g1577 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1577 Dere-ChrDere12 28268289 28273930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1577 367 482 Receptor kinase-like Gene Family AT4G11530 47.101 1.31e-29 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere12g1577 Pkinase 1.1e-13 CL0016