Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1575 ATGGAAGTATGGCATGGGAATTCGATTTCAGAAGCAAACACAAACCTTTCTTCTAGGGATATGGATGGAGGAATAAGGGTTGGCGAAAAGATCCGGGGGGGTGTTCCGAGGAATGAGAGTGAGGAGATAATGGATTTCTGGCCAGAATTTCTTGCGAGCAGCTGGGGTAGAGAGTTCGTCGCCGGAGGCTTTGGAGGCATTGCCGGAATAATCTCCGGCTACCCACTCGACACCCTTCGCATCCGTCAACAGAGCTCCAACACAGGCTCTGCTTTCTCCATCCTCAGACATGTGGTGGCCAAGGAAGGACCATCTGCTCTGTACAGAGGCATGACTGCTCCTTTGGCCTCTGTCACTTTTCAGAATGCTATGGTATTCCAAATCTACGCAGTTTTCTCAAGAGCATTTGACTTATCAGTCTCAGCCAACGCCCCTCCTTCCTACATGGGCGTTGCTCTAGGGGGAGTCACCACCGGGGCCCTACAAAGCCTCCTCCTTTCCCCAGTAGAACTGGTCAAAATTCGCCTTCAGCTCCAAAACACAGGCAAAGTGACAGAATCTCACAAGGGTCCCTCACAGGTGGCCAAGACCATATGGAGGAAAGAGGGTCTTAAGGGTATGTACAGAGGACTAGGCATCACTGTGCTCAGAGACGCACCTTCTCATGGCTTCTACTTCTGGACCTACGAGTACATGAGAGAACAGCTTCACCCTGGTTGCAGGAAAAGTGGGCACGAAAGCTTGAACACTATGTTAATGGCAGGAGGGCTAGCAGGCGTAGCGAGCTGGGTCTGTTGCTACCCTTTGGATGTTATAAAGACGAGACTTCAGGCTCAAACCCCATCTTCAGTGAAGTACAAAGGCATCTTGGATTGCCTCAGAAAGAGTGCGAAAGAAGAAGGGTACGTTGTGCTATGGCGAGGCTTAGGAACTGCTGTTGCTAGAGCGTTTGTGGTGAATGGGGCTATATTTTCTGCTTATGAGATTTCTCTGAGGTGCTTGTTTAACAATGGAAGTATTCAAATGGAAGAAACTATCTGA 1041 0.4957 MEVWHGNSISEANTNLSSRDMDGGIRVGEKIRGGVPRNESEEIMDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRIRQQSSNTGSAFSILRHVVAKEGPSALYRGMTAPLASVTFQNAMVFQIYAVFSRAFDLSVSANAPPSYMGVALGGVTTGALQSLLLSPVELVKIRLQLQNTGKVTESHKGPSQVAKTIWRKEGLKGMYRGLGITVLRDAPSHGFYFWTYEYMREQLHPGCRKSGHESLNTMLMAGGLAGVASWVCCYPLDVIKTRLQAQTPSSVKYKGILDCLRKSAKEEGYVVLWRGLGTAVARAFVVNGAIFSAYEISLRCLFNNGSIQMEETI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1575 346 Pfam Mitochondrial carrier protein 54 136 IPR018108 -
Dere12g1575 346 Pfam Mitochondrial carrier protein 149 236 IPR018108 -
Dere12g1575 346 Pfam Mitochondrial carrier protein 250 337 IPR018108 -
Dere12g1575 346 Gene3D Mitochondrial carrier domain 50 337 IPR023395 -
Dere12g1575 346 SUPERFAMILY Mitochondrial carrier 55 328 IPR023395 -
Dere12g1575 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 235 IPR018108 -
Dere12g1575 346 FunFam Mitochondrial arginine transporter BAC2 54 344 - -
Dere12g1575 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 333 IPR018108 -
Dere12g1575 346 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 53 334 - -
Dere12g1575 346 PRINTS Mitochondrial carrier protein signature 58 71 IPR002067 GO:0055085
Dere12g1575 346 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Dere12g1575 346 PRINTS Mitochondrial carrier protein signature 208 226 IPR002067 GO:0055085
Dere12g1575 346 PRINTS Mitochondrial carrier protein signature 161 179 IPR002067 GO:0055085
Dere12g1575 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 56 135 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1575 Dere-ChrDere12 28257312 28260229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1575 44 337 Antiporters AT1G79900 75.593 2.87e-153 431