Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1573 ATGAACGGAGGAGGGAGGCAAGGGCAGAGATCTGGTGCGACGGGGGTGCACCACCAGCGCCAGTACTCGGACAACTTTCTGGACAGCTCGTCCAATGGGAGGTGGCTCCAGTCGGCTGGTCTTCAACACCTTCAATCCTCCGGAAATTCCATTCCTCCACTTCAGGATTATAACTTCTATGGTGGAGGAGGGCAGGGAGCCAGAATGTTTAGGAATGCGCAGAGGAGCTTTAATGGAGTGAATGAATATAATAGGGAACCGTCCACACCTCCAGGTAATCATCGGTATTCAAACCAGAGAAAGAATGGTGAAGATTCACCCGGTGATTTCAGCCCTGGACTGTTGGATCTGCATTCATTTGATACAGAGCTTATTCCTGAGATGCCGGTTACTGATGTATATGAAAGTAACTCCATGTGTCATCCTGCTCGGGGTAGAAGCTTTGATGACTCTGAGCCTTACATTTCAAACAAACAAATTGGTGGAGCTCGTGCTGCTGAAAATAACCTCCTCAAAAGTTTTTCTGCAGACAAAGATAAATCTAGTTCTGTTGCAAAGATTAAAGTTGTGGTGCGCAAGAGGCCACTCAATAAGAAGGAATTAGCAAAGAATGAGGAGGATATTATAGAAACACACTCCAATTCTTTAACAGTACATGAAACTAAGCTTAAGGTTGACTTAACTCAATATTTAGAAAAGCATGAATTTGTTTTTGATGCTGTCTTGAATGAAGAGGTTACGAATGATGAGGTCTATTGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTTCAACGCACTAAGGCAACTTGCTTTGCTTATGGGCAAACAGGTAGTGGAAAAACTTACACAATGAAGCCGCTGCCGATTAAAGCATCAAGGGACATCTTGAGATTGATGCACCATACTTACAGGAACCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGAGGAAAGCTTTTTGATCTTCTTAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAATACAAAGTATCAGATGTGGAGACTATCAAGGAGTTGATTGAGAAAGGAAATTCCACAAGAAGTACTGGCACCACAGGTGCGAATGAGGAATCCTCACGATCACATGCAATACTCCAGCTTGCCATCAAGAGGTTAGTTGATGGCAATGCATCCAAGCCTCCCCGTGCCGTTGGCAAGCTCTCCTTCATTGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAGACCAGAATTGAAGGTGCTGAGATCAACAAGAGCTTACTTGCCTTGAAGGAGTGCATTAGAGCTCTAGATAACGACCAGGGACACATCCCTTTCAGAGGCAGTAAATTGACTGAGGTTTTGAGGGATTCATTTGTGGGCAACTCCCGCACTGTTATGATTTCATGCATATCACCAAGCTCAGGTTCATGCGAACATACACTTAACACATTAAGATATGCTGACAGGGTGAAAAGCCTGTCAAAAGGGAACAACCCTAAAAAGGATGTTTTATCTTCAAATTTCAACCTTAAGGAATCAACTACTATTCCTTTATCTTCAGCTACTGCATCAGCCTTTGAGGAACGTGCAGCTGATGCATGGCCTGAAGAAAATGACGATGATGAATTTAGTCCATCTGAAGAGTACTATGAGCCAGGGAAGCCTTCATGGAAGAAAAATGGAAAGATAGAACCATATGGTACCACCGAGGACAAGTTAAAGAAACCCAATGGCCAGATCAAATGGAAAGACATGCCAAAAGTTGAATCCACTACAAATTCAGACGATGACTTAAATGCCCTCCTACAGGAAGAGGAAGACCTTGTAAATGCTCACAGGAAACAAGTAGAGGATACCATGAACATTGTCAGAGAGGAGATGAACCTCTTGGTTGAAGCCGATCAGCCAGGGAATCAACTAGATGGTTATATAACAAGATTAAACGCCATTCTATCTCAGAAGGCTGCAGCTATCCTCCAGTTACAAAATCATTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTATGGTTTCATCTGCTGGTTACTAA 2103 0.428 MNGGGRQGQRSGATGVHHQRQYSDNFLDSSSNGRWLQSAGLQHLQSSGNSIPPLQDYNFYGGGGQGARMFRNAQRSFNGVNEYNREPSTPPGNHRYSNQRKNGEDSPGDFSPGLLDLHSFDTELIPEMPVTDVYESNSMCHPARGRSFDDSEPYISNKQIGGARAAENNLLKSFSADKDKSSSVAKIKVVVRKRPLNKKELAKNEEDIIETHSNSLTVHETKLKVDLTQYLEKHEFVFDAVLNEEVTNDEVYCETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPIKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYKVSDVETIKELIEKGNSTRSTGTTGANEESSRSHAILQLAIKRLVDGNASKPPRAVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNPKKDVLSSNFNLKESTTIPLSSATASAFEERAADAWPEENDDDEFSPSEEYYEPGKPSWKKNGKIEPYGTTEDKLKKPNGQIKWKDMPKVESTTNSDDDLNALLQEEEDLVNAHRKQVEDTMNIVREEMNLLVEADQPGNQLDGYITRLNAILSQKAAAILQLQNHLAHFQKRLKEHNVMVSSAGY 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1573 700 SMART kinesin_4 184 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere12g1573 700 Gene3D Kinesin motor domain 164 512 IPR036961 -
Dere12g1573 700 PRINTS Kinesin heavy chain signature 459 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere12g1573 700 PRINTS Kinesin heavy chain signature 375 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere12g1573 700 PRINTS Kinesin heavy chain signature 266 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere12g1573 700 PRINTS Kinesin heavy chain signature 409 427 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere12g1573 700 MobiDBLite consensus disorder prediction 547 592 - -
Dere12g1573 700 MobiDBLite consensus disorder prediction 80 113 - -
Dere12g1573 700 ProSitePatterns Kinesin motor domain signature. 408 419 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dere12g1573 700 FunFam Kinesin-like protein 166 512 - -
Dere12g1573 700 MobiDBLite consensus disorder prediction 568 592 - -
Dere12g1573 700 Pfam Kinesin motor domain 192 508 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere12g1573 700 Coils Coil 618 638 - -
Dere12g1573 700 CDD KISc_KIF2_like 186 507 - -
Dere12g1573 700 MobiDBLite consensus disorder prediction 80 97 - -
Dere12g1573 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 509 IPR027417 -
Dere12g1573 700 ProSiteProfiles Kinesin motor domain profile. 186 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere12g1573 700 MobiDBLite consensus disorder prediction 1 30 - -
Dere12g1573 700 PANTHER KINESIN-RELATED PROTEIN 6 561 694 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1573 Dere-ChrDere12 28248026 28253887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1573 186 521 Calmodulin-binding Proteins AT5G65930 34.682 2.40e-44 170